RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 CDH11P55287 796 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 PAX9P55771 341 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 WNT4P56705 351 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 CD81P60033 236 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 SELENOTP62341 195 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 GNG3P63215 75 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 EWSR1Q01844 656 aaKnown RBP eCLIP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 ELAVL2Q12926 359 aaKnown RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 CDH18Q13634 790 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 MELKQ14680 651 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 SURF2Q15527 256 aaPredicted RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 PLPPR5Q32ZL2 321 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 ZNF585BQ52M93 769 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 SPIN4Q56A73 249 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 ACTL10Q5JWF8 245 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 METRNLQ641Q3 311 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 ZNF776Q68DI1 518 aaPredicted RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 CES5AQ6NT32 575 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 PWWP2BQ6NUJ5 590 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 UNQ6126/PRO20091Q6UXV3 157 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 ZNF767PQ75MW2 155 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 MAVSQ7Z434 540 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 MRPL52Q86TS9 123 aaKnown RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 ACOT1Q86TX2 421 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 NLRX1Q86UT6 975 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 LRRC28Q86X40 367 aaPredicted RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 UEVLDQ8IX04 471 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 SKA3Q8IX90 412 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 CADM2Q8N3J6 435 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 JAGN1Q8N5M9 183 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 ARIH2OSQ8N7S6 290 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 MDS2Q8NDY4 140 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 TMEM52Q8NDY8 209 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 OR10A6Q8NH74 314 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 TNFAIP8L1Q8WVP5 186 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 C1orf54Q8WWF1 131 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 TFAP2BQ92481 460 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 RAB8BQ92930 207 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 SCRN2Q96FV2 425 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 TXNDC15Q96J42 360 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 TBX5Q99593 518 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 LPAR4Q99677 370 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 SLC6A7Q99884 636 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 QTRT1Q9BXR0 403 aaKnown RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 TM6SF1Q9BZW5 370 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 CHST5Q9GZS9 411 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 TMEM39BQ9GZU3 492 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 BEX1Q9HBH7 125 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 AMBNQ9NP70 447 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 FLRT1Q9NZU1 646 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 B4GALT7Q9UBV7 327 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 SS18L2Q9UHA2 77 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 FBXL4Q9UKA2 621 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 PYCARDQ9ULZ3 195 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 RNF6Q9Y252 685 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 MYH3P11055 1940 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 ZNF608Q9ULD9 1512 aaPredicted RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 C3orf70A6NLC5 250 aaPredicted RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 SEC14L6B5MCN3 397 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 H0YL77 283 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 H7C2Y5 167 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 TM4SF5O14894 197 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 MSH4O15457 936 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 TCF21O43680 179 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 NARSO43776 548 aaKnown RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 ANXA9O76027 345 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 AGFG2O95081 481 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 CTSLP07711 333 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 ATXN1LP0C7T5 689 aaKnown RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 TMEM225BP0DP42 221 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 ZNF17P17021 662 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 GPX2P18283 190 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 CASP1P29466 404 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 BDKRB1P46663 353 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 EVX1P49640 407 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 NR0B1P51843 470 aaKnown RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 CDH12P55289 794 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 OR10A3P58181 314 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 RPS20P60866 119 aaKnown RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 CKS1BP61024 79 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 STXBP1P61764 594 aaKnown RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 PKIAP61925 76 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 RRAS2P62070 204 aaPredicted RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 TWF1Q12792 350 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 FOXL1Q12952 345 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 VGLL4Q14135 290 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 FASTKQ14296 549 aaKnown RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 TMEM132DQ14C87 1099 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 TSNQ15631 228 aaKnown RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 TAB1Q15750 504 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 DUSP6Q16828 381 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 MS4A18Q3C1V0 323 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 CEACAM21Q3KPI0 293 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 ARHGAP11BQ3KRB8 267 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 CDNFQ49AH0 187 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 TCTEX1D4Q5JR98 221 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 OTUD1Q5VV17 481 aaPredicted RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 TMEM268Q5VZI3 342 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 HIST2H2AA3Q6FI13 130 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 SMARCD3Q6STE5 483 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms