RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 RPS21P63220 83 aaKnown RBP2.56□□□□□ -2
CLK1-213ENST00000492793 ACTG2P63267 376 aa2.56□□□□□ -2
CLK1-213ENST00000492793 ACTC1P68032 377 aa2.56□□□□□ -2
CLK1-213ENST00000492793 MRPS22P82650 360 aaKnown RBP2.56□□□□□ -2
CLK1-213ENST00000492793 ZNF92Q03936 586 aa2.56□□□□□ -2
CLK1-213ENST00000492793 ZSCAN26Q16670 478 aa2.56□□□□□ -2
CLK1-213ENST00000492793 VPS26BQ4G0F5 336 aa2.56□□□□□ -2
CLK1-213ENST00000492793 CCDC183Q5T5S1 534 aa2.56□□□□□ -2
CLK1-213ENST00000492793 Q6P435 159 aa2.56□□□□□ -2
CLK1-213ENST00000492793 ZNF836Q6ZNA1 936 aa2.56□□□□□ -2
CLK1-213ENST00000492793 LINC00173Q6ZV60 143 aa2.56□□□□□ -2
CLK1-213ENST00000492793 H2AFVQ71UI9 128 aa2.56□□□□□ -2
CLK1-213ENST00000492793 PEX26Q7Z412 305 aa2.56□□□□□ -2
CLK1-213ENST00000492793 OAFQ86UD1 273 aa2.56□□□□□ -2
CLK1-213ENST00000492793 CDH26Q8IXH8 852 aa2.56□□□□□ -2
CLK1-213ENST00000492793 RHEBL1Q8TAI7 183 aa2.56□□□□□ -2
CLK1-213ENST00000492793 PLPPR1Q8TBJ4 325 aa2.56□□□□□ -2
CLK1-213ENST00000492793 STARD4Q96DR4 205 aa2.56□□□□□ -2
CLK1-213ENST00000492793 CCDC126Q96EE4 140 aa2.56□□□□□ -2
CLK1-213ENST00000492793 PLIN2Q99541 437 aa2.56□□□□□ -2
CLK1-213ENST00000492793 VCXQ9H320 206 aa2.56□□□□□ -2
CLK1-213ENST00000492793 RPF2Q9H7B2 306 aaKnown RBP2.56□□□□□ -2
CLK1-213ENST00000492793 UGT1A7Q9HAW7 530 aa2.56□□□□□ -2
CLK1-213ENST00000492793 UGT1A10Q9HAW8 530 aa2.56□□□□□ -2
CLK1-213ENST00000492793 UGT1A8Q9HAW9 530 aa2.56□□□□□ -2
CLK1-213ENST00000492793 DMAP1Q9NPF5 467 aaPredicted RBP2.56□□□□□ -2
CLK1-213ENST00000492793 PISDQ9UG56 409 aa2.56□□□□□ -2
CLK1-213ENST00000492793 SHPKQ9UHJ6 478 aa2.56□□□□□ -2
CLK1-213ENST00000492793 A0A0U1RQS6 177 aa2.55□□□□□ -2
CLK1-213ENST00000492793 A0A1W2PPE3 182 aa2.55□□□□□ -2
CLK1-213ENST00000492793 SMCO3A2RU48 225 aa2.55□□□□□ -2
CLK1-213ENST00000492793 HIDE1A8MVS5 230 aa2.55□□□□□ -2
CLK1-213ENST00000492793 ANKRD63C9JTQ0 380 aa2.55□□□□□ -2
CLK1-213ENST00000492793 CD5LO43866 347 aa2.55□□□□□ -2
CLK1-213ENST00000492793 SS18L1O75177 396 aaPredicted RBP2.55□□□□□ -2
CLK1-213ENST00000492793 CLIC3O95833 236 aa2.55□□□□□ -2
CLK1-213ENST00000492793 CST1P01037 141 aa2.55□□□□□ -2
CLK1-213ENST00000492793 IGKV3-11P04433 115 aa2.55□□□□□ -2
CLK1-213ENST00000492793 IGHV3-43DP0DP04 118 aa2.55□□□□□ -2
CLK1-213ENST00000492793 ZNF24P17028 368 aa2.55□□□□□ -2
CLK1-213ENST00000492793 SERPINB5P36952 375 aa2.55□□□□□ -2
CLK1-213ENST00000492793 RPS9P46781 194 aaKnown RBP2.55□□□□□ -2
CLK1-213ENST00000492793 PPOXP50336 477 aa2.55□□□□□ -2
CLK1-213ENST00000492793 CRISP3P54108 245 aa2.55□□□□□ -2
CLK1-213ENST00000492793 HMGCS1Q01581 520 aa2.55□□□□□ -2
CLK1-213ENST00000492793 MADCAM1Q13477 382 aa2.55□□□□□ -2
CLK1-213ENST00000492793 PTGES3Q15185 160 aaKnown RBP2.55□□□□□ -2
CLK1-213ENST00000492793 TMEM179Q6ZVK1 233 aa2.55□□□□□ -2
CLK1-213ENST00000492793 NIPA1Q7RTP0 329 aa2.55□□□□□ -2
CLK1-213ENST00000492793 LIX1Q8N485 282 aa2.55□□□□□ -2
CLK1-213ENST00000492793 B3GNT7Q8NFL0 401 aa2.55□□□□□ -2
CLK1-213ENST00000492793 SRSF12Q8WXF0 261 aaKnown RBP2.55□□□□□ -2
CLK1-213ENST00000492793 TMEM54Q969K7 222 aa2.55□□□□□ -2
CLK1-213ENST00000492793 BMFQ96LC9 184 aa2.55□□□□□ -2
CLK1-213ENST00000492793 P2RX4Q99571 388 aa2.55□□□□□ -2
CLK1-213ENST00000492793 GPR61Q9BZJ8 451 aa2.55□□□□□ -2
CLK1-213ENST00000492793 KCNJ16Q9NPI9 418 aa2.55□□□□□ -2
CLK1-213ENST00000492793 INPP5EQ9NRR6 644 aa2.55□□□□□ -2
CLK1-213ENST00000492793 STARD10Q9Y365 291 aa2.55□□□□□ -2
CLK1-213ENST00000492793 CEMIPQ8WUJ3 1361 aa2.54□□□□□ -2
CLK1-213ENST00000492793 IGLV4-69A0A075B6H9 119 aa2.54□□□□□ -2
CLK1-213ENST00000492793 IGLV11-55A0A075B6I3 123 aa2.54□□□□□ -2
CLK1-213ENST00000492793 XKRY2A2RUG3 117 aa2.54□□□□□ -2
CLK1-213ENST00000492793 GOLGA8OA6NCC3 632 aa2.54□□□□□ -2
CLK1-213ENST00000492793 ZNF726A6NNF4 738 aa2.54□□□□□ -2
CLK1-213ENST00000492793 LRRIQ3A6PVS8 624 aaPredicted RBP2.54□□□□□ -2
CLK1-213ENST00000492793 GOLGA8NF8WBI6 632 aa2.54□□□□□ -2
CLK1-213ENST00000492793 AIM2O14862 343 aa2.54□□□□□ -2
CLK1-213ENST00000492793 RNF13O43567 381 aa2.54□□□□□ -2
CLK1-213ENST00000492793 BGLAPP02818 100 aa2.54□□□□□ -2
CLK1-213ENST00000492793 FABP3P05413 133 aa2.54□□□□□ -2
CLK1-213ENST00000492793 ANXA5P08758 320 aa2.54□□□□□ -2
CLK1-213ENST00000492793 GDI1P31150 447 aa2.54□□□□□ -2
CLK1-213ENST00000492793 CYB561P49447 251 aa2.54□□□□□ -2
CLK1-213ENST00000492793 NCBP2P52298 156 aaKnown RBP eCLIP2.54□□□□□ -28e-8■□□□□ 9.9
CLK1-213ENST00000492793 NUTF2P61970 127 aaKnown RBP2.54□□□□□ -2
CLK1-213ENST00000492793 IRX3P78415 501 aaPredicted RBP2.54□□□□□ -2
CLK1-213ENST00000492793 SLC7A9P82251 487 aa2.54□□□□□ -2
CLK1-213ENST00000492793 PAX5Q02548 391 aa2.54□□□□□ -2
CLK1-213ENST00000492793 TWF1Q12792 350 aa2.54□□□□□ -2
CLK1-213ENST00000492793 TCP10Q12799 353 aa2.54□□□□□ -2
CLK1-213ENST00000492793 CLINT1Q14677 625 aa2.54□□□□□ -2
CLK1-213ENST00000492793 TTLL9Q3SXZ7 439 aa2.54□□□□□ -2
CLK1-213ENST00000492793 ANKRD26P1Q6NSI1 321 aa2.54□□□□□ -2
CLK1-213ENST00000492793 SLC25A48Q6ZT89 311 aaKnown RBP2.54□□□□□ -2
CLK1-213ENST00000492793 STRADAQ7RTN6 431 aa2.54□□□□□ -2
CLK1-213ENST00000492793 TMEM135Q86UB9 458 aa2.54□□□□□ -2
CLK1-213ENST00000492793 CDR2LQ86X02 465 aaPredicted RBP2.54□□□□□ -2
CLK1-213ENST00000492793 HSD17B11Q8NBQ5 300 aa2.54□□□□□ -2
CLK1-213ENST00000492793 OR56B2PQ8NGI1 322 aa2.54□□□□□ -2
CLK1-213ENST00000492793 SLC7A13Q8TCU3 470 aa2.54□□□□□ -2
CLK1-213ENST00000492793 CD300LFQ8TDQ1 290 aa2.54□□□□□ -2
CLK1-213ENST00000492793 GIMAP1Q8WWP7 306 aa2.54□□□□□ -2
CLK1-213ENST00000492793 PIBF1Q8WXW3 757 aa2.54□□□□□ -2
CLK1-213ENST00000492793 FAM104AQ969W3 186 aa2.54□□□□□ -2
CLK1-213ENST00000492793 TSSK3Q96PN8 268 aa2.54□□□□□ -2
CLK1-213ENST00000492793 ATP5SQ99766 215 aa2.54□□□□□ -2
CLK1-213ENST00000492793 NUP58Q9BVL2 599 aa2.54□□□□□ -2
CLK1-213ENST00000492793 SLC17A9Q9BYT1 436 aa2.54□□□□□ -2
CLK1-213ENST00000492793 FAM192AQ9GZU8 254 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms