RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 TNFRSF13CQ96RJ3 184 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 HDHD5Q9BXW7 423 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 SRRQ9GZT4 340 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 GSTO2Q9H4Y5 243 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 C12orf49Q9H741 205 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 EMC7Q9NPA0 242 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 SLC52A3Q9NQ40 469 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 SLC35C2Q9NQQ7 365 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 FBXO34Q9NWN3 711 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 SEC14L4Q9UDX3 406 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 UBQLN2Q9UHD9 624 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 NDRG4Q9ULP0 352 aaKnown RBP11.62□□□□□ -0.55
HDAC3-213ENST00000492506 PCDHB14Q9Y5E9 798 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 GPR45Q9Y5Y3 372 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 TSPAN4O14817 238 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 ANKRD28O15084 1053 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 RGS5O15539 181 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 GMFGO60234 142 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 SLC22A3O75751 556 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 OR5F1O95221 314 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 NTN1O95631 604 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 IL33O95760 270 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 LGI1O95970 557 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 OPN1LWP04000 364 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 RRASP10301 218 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 ZNF17P17021 662 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 RRAS2P62070 204 aaPredicted RBP11.61□□□□□ -0.55
HDAC3-213ENST00000492506 PRR5P85299 388 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 VLDLRP98155 873 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 SRSF2Q01130 221 aaKnown RBP11.61□□□□□ -0.55
HDAC3-213ENST00000492506 CD83Q01151 205 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 HSF2Q03933 536 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 PIGFQ07326 219 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 C17orf67Q0P5P2 114 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 ZNF155Q12901 538 aaPredicted RBP11.61□□□□□ -0.55
HDAC3-213ENST00000492506 TEX261Q6UWH6 196 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 TFAP2EQ6VUC0 442 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 GTPBP8Q8N3Z3 284 aaPredicted RBP11.61□□□□□ -0.55
HDAC3-213ENST00000492506 DUSP18Q8NEJ0 188 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 OR4M1Q8NGD0 313 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 FYTTD1Q96QD9 318 aaKnown RBP11.61□□□□□ -0.55
HDAC3-213ENST00000492506 RHNO1Q9BSD3 238 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 COPS4Q9BT78 406 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 BEX2Q9BXY8 128 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 SMURF2Q9HAU4 748 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 BARX1Q9HBU1 254 aaPredicted RBP11.61□□□□□ -0.55
HDAC3-213ENST00000492506 IL1RAPQ9NPH3 570 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 PCDHB16Q9NRJ7 776 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 ZNF224Q9NZL3 707 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 GMPR2Q9P2T1 348 aaKnown RBP11.61□□□□□ -0.55
HDAC3-213ENST00000492506 ADAM30Q9UKF2 790 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 MCTS1Q9ULC4 181 aaKnown RBP11.61□□□□□ -0.55
HDAC3-213ENST00000492506 VDAC3Q9Y277 283 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 B3GALT5Q9Y2C3 310 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 U3KQ87 197 aa11.61□□□□□ -0.55
HDAC3-213ENST00000492506 A0A087WV62 115 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 A0A0J9YW62 118 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 A0A1B0GW55 424 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 ELOA3DA6NLF2 546 aaPredicted RBP11.6□□□□□ -0.55
HDAC3-213ENST00000492506 SHISA9B4DS77 424 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 HAX1O00165 279 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 TNFSF11O14788 317 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 XPNPEP2O43895 674 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 RAMP1O60894 148 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 PTP4A3O75365 173 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 IGKV1D-16P01601 117 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 HLA-DQB1P01920 261 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 APOC1P02654 83 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 CDK1P06493 297 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 DUX4L2P0CJ85 424 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 DUX4L3P0CJ86 424 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 DUX4L4P0CJ87 422 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 DUX4L5P0CJ88 424 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 DUX4L6P0CJ89 424 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 DUX4L7P0CJ90 424 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 DDCP20711 480 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 PRKAR1BP31321 381 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 TNFSF8P32971 234 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 MAP2K3P46734 347 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 RORCP51449 518 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 POLR2JP52435 117 aaKnown RBP11.6□□□□□ -0.55
HDAC3-213ENST00000492506 RAC1P63000 192 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 LOXL1Q08397 574 aaPredicted RBP11.6□□□□□ -0.55
HDAC3-213ENST00000492506 DECR1Q16698 335 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 UGT3A2Q3SY77 523 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 ELOA3BQ3SY89 546 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 ZNF678Q5SXM1 525 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 PDZK1Q5T2W1 519 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 GPR139Q6DWJ6 353 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 OVCH2Q7RTZ1 564 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 C16orf62Q7Z3J2 963 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 NUFIP2Q7Z417 695 aaKnown RBP11.6□□□□□ -0.55
HDAC3-213ENST00000492506 FAM9CQ8IZT9 166 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 ZNF619Q8N2I2 560 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 C9orf62Q8N4C0 152 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 ZNF680Q8NEM1 530 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 ELOA3Q8NG57 546 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 OR2V1Q8NHB1 315 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 CNIH3Q8TBE1 160 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 TWIST2Q8WVJ9 160 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms