RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 GUSBP08236 651 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 ALOX5APP20292 161 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 VEGFCP49767 419 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 MMP15P51511 669 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 GALK2Q01415 458 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 SNTB2Q13425 540 aaKnown RBP11.23□□□□□ -0.61
HMGN1-220ENST00000492280 KLF9Q13886 244 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-220ENST00000492280 PTCRAQ6ISU1 281 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-220ENST00000492280 PWWP2BQ6NUJ5 590 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 GUSBP11Q6P575 273 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 CORO6Q6QEF8 472 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 UNQ9370/PRO34162Q6UXP9 181 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 ZNF574Q6ZN55 896 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-220ENST00000492280 OVCH1Q7RTY7 1134 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 ADGRG3Q86Y34 549 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 PLXDC1Q8IUK5 500 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 D2HGDHQ8N465 521 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 OR2T4Q8NH00 348 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 SMIM4Q8WVI0 70 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 DAZLQ92904 295 aaKnown RBP11.23□□□□□ -0.61
HMGN1-220ENST00000492280 OR1F2PQ96R84 312 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 UCK1Q9HA47 277 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 APMAPQ9HDC9 416 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 EPHA6Q9UF33 1036 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 IGKV1D-43A0A0B4J1Z2 117 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 ANXA2P2A6NMY6 339 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 OR4C45A6NMZ5 311 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 ALG1L2C9J202 215 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 ERVH48-1M5A8F1 160 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 ANXA2P07355 339 aaKnown RBP11.22□□□□□ -0.61
HMGN1-220ENST00000492280 SSTR2P30874 369 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 HTR2BP41595 481 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 EIF1AXP47813 144 aaKnown RBP11.22□□□□□ -0.61
HMGN1-220ENST00000492280 ARRB1P49407 418 aaPredicted RBP11.22□□□□□ -0.61
HMGN1-220ENST00000492280 GUCA2AQ02747 115 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 MAB21L1Q13394 359 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 CCDC58Q4VC31 144 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 TMEM69Q5SWH9 247 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 EEF1A1P5Q5VTE0 462 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 MAMSTRQ6ZN01 415 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 WDR89Q96FK6 387 aaPredicted RBP11.22□□□□□ -0.61
HMGN1-220ENST00000492280 MSANTD3Q96H12 275 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 LRFN5Q96NI6 719 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 EMC6Q9BV81 110 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 GHITMQ9H3K2 345 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 EXOSC3Q9NQT5 275 aaKnown RBP11.22□□□□□ -0.61
HMGN1-220ENST00000492280 TAS2R10Q9NYW0 307 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 EXPH5Q8NEV8 1989 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 ANKRD34BA5PLL1 514 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 GPRIN2O60269 458 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 KHDRBS3O75525 346 aaKnown RBP11.22□□□□□ -0.61
HMGN1-220ENST00000492280 ITGA10O75578 1167 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 NUDT1P36639 197 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 ADAM8P78325 824 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 C1orf140Q5VVS0 124 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 LCN10Q6JVE6 187 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 BIVMQ86UB2 503 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 OR51D1Q8NGF3 324 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 ZFAND1Q8TCF1 268 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 OR6C1Q96RD1 312 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 SEC22CQ9BRL7 303 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 NDEL1Q9GZM8 345 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 OR51J1Q9H342 316 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 TRAV36DV7A0A075B6V5 113 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 NUDT21O43809 227 aaKnown RBP11.22□□□□□ -0.61
HMGN1-220ENST00000492280 LMX1BO60663 402 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 ZNF780AO75290 641 aaPredicted RBP11.22□□□□□ -0.61
HMGN1-220ENST00000492280 C1QBP02746 253 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 PTH2RP49190 550 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 AFF3P51826 1226 aaKnown RBP11.22□□□□□ -0.61
HMGN1-220ENST00000492280 SLC25A1P53007 311 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 RNF4P78317 190 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 IL10RAQ13651 578 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 OR7A5Q15622 319 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 ASPHD2Q6ICH7 369 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 SNAPC3Q92966 411 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 SCMH1Q96GD3 660 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 CHIAQ9BZP6 476 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 C20orf85Q9H1P6 137 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 EVA1AQ9H8M9 152 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 SUSD2Q9UGT4 822 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 SLC23A1Q9UHI7 598 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 B9D1Q9UPM9 204 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 CAMK2AQ9UQM7 478 aa11.22□□□□□ -0.61
HMGN1-220ENST00000492280 COA3Q9Y2R0 106 aaPredicted RBP11.22□□□□□ -0.61
HMGN1-220ENST00000492280 MRPS17Q9Y2R5 130 aaKnown RBP11.22□□□□□ -0.61
HMGN1-220ENST00000492280 COL5A1P20908 1838 aaPredicted RBP11.21□□□□□ -0.61
HMGN1-220ENST00000492280 LOC400499M0QZD8 3231 aa11.21□□□□□ -0.61
HMGN1-220ENST00000492280 ARPC1BO15143 372 aaKnown RBP11.21□□□□□ -0.61
HMGN1-220ENST00000492280 SSNA1O43805 119 aa11.21□□□□□ -0.61
HMGN1-220ENST00000492280 OR6A2O95222 327 aa11.21□□□□□ -0.61
HMGN1-220ENST00000492280 DHFRP00374 187 aa11.21□□□□□ -0.61
HMGN1-220ENST00000492280 GLB1P16278 677 aa11.21□□□□□ -0.61
HMGN1-220ENST00000492280 PGCP20142 388 aa11.21□□□□□ -0.61
HMGN1-220ENST00000492280 UBE2MP61081 183 aaKnown RBP11.21□□□□□ -0.61
HMGN1-220ENST00000492280 SHBQ15464 509 aa11.21□□□□□ -0.61
HMGN1-220ENST00000492280 Q6ZTK2 550 aa11.21□□□□□ -0.61
HMGN1-220ENST00000492280 SLC43A2Q8N370 569 aa11.21□□□□□ -0.61
HMGN1-220ENST00000492280 CADM4Q8NFZ8 388 aa11.21□□□□□ -0.61
HMGN1-220ENST00000492280 OTOSQ8NHW6 89 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms