RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 NELFAQ9H3P2 528 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 CDH20Q9HBT6 801 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 NOX3Q9HBY0 568 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 SPAG4Q9NPE6 437 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 TAS2R5Q9NYW4 299 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 SLC7A8Q9UHI5 535 aa14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 ZNF346Q9UL40 294 aaKnown RBP14.36□□□□□ -0.11
PDLIM2-217ENST00000491330 CADP27708 2225 aa14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 NF1P21359 2839 aa14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 HEATR1Q9H583 2144 aaKnown RBP14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 SH3PXD2BA1X283 911 aa14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 OR7A10O76100 309 aa14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 MT-ND5P03915 603 aa14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 IFNW1P05000 195 aa14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 QDPRP09417 244 aa14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 ASAH2BP0C7U1 165 aa14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 APEHP13798 732 aaKnown RBP14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 CALCRP30988 508 aa14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 GIPRP48546 466 aa14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 LIPEQ05469 1076 aa14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 FKBP9P1Q75LS8 142 aa14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 SLC16A14Q7RTX9 510 aa14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 PIGWQ7Z7B1 504 aa14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 HIPK1Q86Z02 1210 aa14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 ZNF837Q96EG3 531 aaPredicted RBP14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 SORCS2Q96PQ0 1159 aa14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 RBP7Q96R05 134 aa14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 WFDC6Q9BQY6 131 aa14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 FNDC11Q9BVV2 318 aa14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 SHARPINQ9H0F6 387 aa14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 CMTM6Q9NX76 183 aa14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 B3GNT2Q9NY97 397 aa14.35□□□□□ -0.11
PDLIM2-217ENST00000491330 M0R233 179 aa14.34□□□□□ -0.11
PDLIM2-217ENST00000491330 SYNGR3O43761 229 aa14.34□□□□□ -0.11
PDLIM2-217ENST00000491330 SERPINA5P05154 406 aa14.34□□□□□ -0.11
PDLIM2-217ENST00000491330 DAOP14920 347 aa14.34□□□□□ -0.11
PDLIM2-217ENST00000491330 GLRXP35754 106 aa14.34□□□□□ -0.11
PDLIM2-217ENST00000491330 NR4A2P43354 598 aa14.34□□□□□ -0.11
PDLIM2-217ENST00000491330 SLC7A2P52569 658 aa14.34□□□□□ -0.11
PDLIM2-217ENST00000491330 HGFACQ04756 655 aa14.34□□□□□ -0.11
PDLIM2-217ENST00000491330 PIN1Q13526 163 aaPredicted RBP14.34□□□□□ -0.11
PDLIM2-217ENST00000491330 TBC1D28Q2M2D7 210 aa14.34□□□□□ -0.11
PDLIM2-217ENST00000491330 ANKDD1AQ495B1 522 aa14.34□□□□□ -0.11
PDLIM2-217ENST00000491330 PHYHD1Q5SRE7 291 aa14.34□□□□□ -0.11
PDLIM2-217ENST00000491330 TREML1Q86YW5 311 aa14.34□□□□□ -0.11
PDLIM2-217ENST00000491330 SVOPLQ8N434 492 aa14.34□□□□□ -0.11
PDLIM2-217ENST00000491330 GEMIN6Q8WXD5 167 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-217ENST00000491330 FAM107BQ9H098 131 aa14.34□□□□□ -0.11
PDLIM2-217ENST00000491330 CCNB1IP1Q9NPC3 277 aa14.34□□□□□ -0.11
PDLIM2-217ENST00000491330 RPS6KA6Q9UK32 745 aa14.34□□□□□ -0.11
PDLIM2-217ENST00000491330 KCNS2Q9ULS6 477 aa14.34□□□□□ -0.11
PDLIM2-217ENST00000491330 NAV3Q8IVL0 2385 aa14.33□□□□□ -0.11
PDLIM2-217ENST00000491330 CXCR6O00574 342 aa14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 CELA3BP08861 270 aa14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 SAGP10523 405 aaPredicted RBP14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 RAD52P43351 418 aa14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 HSF2Q03933 536 aa14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 MELKQ14680 651 aa14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 C6orf52Q5T4I8 152 aa14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 FAM205BPQ63HN1 556 aa14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 FAM166AQ6J272 317 aa14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 WDR88Q6ZMY6 472 aa14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 CBLL1Q75N03 491 aa14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 LRRC17Q8N6Y2 441 aa14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 OR4D11Q8NGI4 311 aa14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 TMEM255BQ8WV15 326 aa14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 LIPHQ8WWY8 451 aa14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 MRPL24Q96A35 216 aaKnown RBP14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 PRRC1Q96M27 445 aa14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 DOK1Q99704 481 aa14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 KCTD14Q9BQ13 255 aaPredicted RBP14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 TMEM38BQ9NVV0 291 aa14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 TMEM160Q9NX00 188 aa14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 EIF3KQ9UBQ5 218 aaKnown RBP14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 REV1Q9UBZ9 1251 aa14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 FAM32AQ9Y421 112 aaKnown RBP14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 PLCE1Q9P212 2302 aa14.33□□□□□ -0.12
PDLIM2-217ENST00000491330 A0A1W2PPW3 197 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 NME4O00746 187 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 GPRIN2O60269 458 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 LYPD3O95274 346 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 ZNF682O95780 498 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 F13BP05160 661 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 ADRA2AP08913 450 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 ACADSP16219 412 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 ZNF14P17017 642 aaPredicted RBP14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 PCMT1P22061 227 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 APLNRP35414 380 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 OR1E2P47887 323 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 CHN2P52757 468 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 PSME3P61289 254 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 RPL18Q07020 188 aaKnown RBP14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 RAB39AQ14964 217 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 TRAM2Q15035 370 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 ALG10Q5BKT4 473 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 RGS7BPQ6MZT1 257 aaPredicted RBP14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 NKAIN4Q8IVV8 208 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 ALDH16A1Q8IZ83 802 aa14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 RNF113BQ8IZP6 322 aaKnown RBP14.32□□□□□ -0.12
PDLIM2-217ENST00000491330 SLC30A7Q8NEW0 376 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms