RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 CCDC74AQ96AQ1 378 aa17.58■□□□□ 0.41
SNAPC3-206ENST00000490969 CMSS1Q9BQ75 279 aaKnown RBP17.58■□□□□ 0.41
SNAPC3-206ENST00000490969 NMNAT2Q9BZQ4 307 aa17.58■□□□□ 0.41
SNAPC3-206ENST00000490969 GAREM1Q9H706 876 aa17.58■□□□□ 0.41
SNAPC3-206ENST00000490969 COMMD9Q9P000 198 aa17.58■□□□□ 0.41
SNAPC3-206ENST00000490969 TRPM6Q9BX84 2022 aa17.58■□□□□ 0.4
SNAPC3-206ENST00000490969 OR2W5A6NFC9 320 aa17.58■□□□□ 0.4
SNAPC3-206ENST00000490969 GNB5O14775 395 aa17.58■□□□□ 0.4
SNAPC3-206ENST00000490969 SMAD9O15198 467 aaKnown RBP17.58■□□□□ 0.4
SNAPC3-206ENST00000490969 ZNF888P0CJ79 500 aaPredicted RBP17.58■□□□□ 0.4
SNAPC3-206ENST00000490969 ELAVL3Q14576 367 aaKnown RBP17.58■□□□□ 0.4
SNAPC3-206ENST00000490969 ENPP7Q6UWV6 458 aa17.58■□□□□ 0.4
SNAPC3-206ENST00000490969 BIVMQ86UB2 503 aa17.58■□□□□ 0.4
SNAPC3-206ENST00000490969 GABRG1Q8N1C3 465 aa17.58■□□□□ 0.4
SNAPC3-206ENST00000490969 ZNF614Q8N883 585 aa17.58■□□□□ 0.4
SNAPC3-206ENST00000490969 OR52E1Q8NGJ3 308 aa17.58■□□□□ 0.4
SNAPC3-206ENST00000490969 THAP6Q8TBB0 222 aa17.58■□□□□ 0.4
SNAPC3-206ENST00000490969 OR8D1Q8WZ84 308 aa17.58■□□□□ 0.4
SNAPC3-206ENST00000490969 ELSPBP1Q96BH3 223 aa17.58■□□□□ 0.4
SNAPC3-206ENST00000490969 DUSP22Q9NRW4 184 aa17.58■□□□□ 0.4
SNAPC3-206ENST00000490969 SPHK1Q9NYA1 384 aa17.58■□□□□ 0.4
SNAPC3-206ENST00000490969 THAP10Q9P2Z0 257 aaPredicted RBP17.58■□□□□ 0.4
SNAPC3-206ENST00000490969 ZNF629Q9UEG4 869 aaPredicted RBP17.58■□□□□ 0.4
SNAPC3-206ENST00000490969 CDV3Q9UKY7 258 aaKnown RBP17.58■□□□□ 0.4
SNAPC3-206ENST00000490969 PRICKLE3O43900 615 aaPredicted RBP17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 UPK3AO75631 287 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 IFNA4P05014 189 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 TACSTD2P09758 323 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 KCNJ3P48549 501 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 ID2Q02363 134 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 SRSF4Q08170 494 aaKnown RBP17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 ATXN7L3Q14CW9 347 aaPredicted RBP17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 C2orf27AQ580R0 203 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 EXOSC6Q5RKV6 272 aaKnown RBP17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 FHL5Q5TD97 284 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 LIPNQ5VXI9 398 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 ACOT7LQ6ZUV0 252 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 SFT2D1Q8WV19 159 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 RASD2Q96D21 266 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 PDCD10Q9BUL8 212 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 RAB11FIP5Q9BXF6 653 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 RXFP3Q9NSD7 469 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 SERGEFQ9UGK8 458 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 MKL2Q9ULH7 1088 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 SCN2AQ99250 2005 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 GLCEO94923 617 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 WNT11O96014 354 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 CPMP14384 443 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 PEBP1P30086 187 aaKnown RBP17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 BLOC1S1P78537 153 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 RAB12Q6IQ22 244 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 ZAR1Q86SH2 424 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 OR1J2Q8NGS2 313 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 C2CD4CQ8TF44 421 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 SUSD6Q92537 303 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 GAL3ST3Q96A11 431 aa17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 MRM2Q9UI43 246 aaKnown RBP17.57■□□□□ 0.4
SNAPC3-206ENST00000490969 TMEM72A0PK05 275 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 BRINP1O60477 761 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 GXYLT1Q4G148 440 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 C10orf91Q5T1B1 145 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 LINC01590Q5TEZ4 76 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 LPCAT3Q6P1A2 487 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 CHRDL2Q6WN34 429 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 DPY19L2P2Q6ZN68 376 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 PGAP1Q75T13 922 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 CDRT4Q8N9R6 151 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 ZNF511Q8NB15 262 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 ALG12Q9BV10 488 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 POTEKPQ9BYX7 375 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 FBXO4Q9UKT5 387 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 KLHDC2Q9Y2U9 406 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 CARHSP1Q9Y2V2 147 aaKnown RBP17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 EML5Q05BV3 1969 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 LDB3O75112 727 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 GLAP06280 429 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 P2RY2P41231 377 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 POU3F4P49335 361 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 POLR2GP62487 172 aaKnown RBP eCLIP17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 SSBP1Q04837 148 aaKnown RBP17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 SWI5Q1ZZU3 235 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 ITPRIPL2Q3MIP1 535 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 IGSF11Q5DX21 431 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 LIN54Q6MZP7 749 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 H3F3CQ6NXT2 135 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 ZNF417Q8TAU3 575 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 SLC25A21Q9BQT8 299 aaPredicted RBP17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 MTCH2Q9Y6C9 303 aa17.56■□□□□ 0.4
SNAPC3-206ENST00000490969 SPTBP11277 2137 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 TRBV5-7A0A0A0MS05 114 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 A0A1B0GTH9 108 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 OR52A4PA6NMU1 304 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 F5H0A9 414 aaPredicted RBP17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 K7EQS6 105 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 RAB3DO95716 219 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 CRYBA1P05813 215 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 CD34P28906 385 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 CASRP41180 1078 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 ACAA2P42765 397 aaKnown RBP17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 ACTBP60709 375 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms