RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 SLC22A24Q8N4F4 322 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 NATD1Q8N6N6 113 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 ZNF283Q8N7M2 679 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 ANKFN1Q8N957 763 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 OR6N1Q8NGY5 312 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 STK35Q8TDR2 534 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 THOC1Q96FV9 657 aaKnown RBP11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 TXNDC15Q96J42 360 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 LRR1Q96L50 414 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 SIGLEC11Q96RL6 698 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 ARHGDIGQ99819 225 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 NUDT16L1Q9BRJ7 211 aaKnown RBP11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 PCGF1Q9BSM1 259 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 MSL2Q9HCI7 577 aa11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 GAR1Q9NY12 217 aaKnown RBP11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 DYNC2H1Q8NCM8 4307 aaKnown RBP11.39□□□□□ -0.59
EXOSC3-207ENST00000490516 G3V2L1 256 aa11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 AIM2O14862 343 aa11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 C1QCP02747 245 aa11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 SFTPBP07988 381 aa11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 CD55P08174 381 aa11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 SNRPAP09012 282 aaKnown RBP11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 PRG2P13727 222 aa11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 RPS2P15880 293 aaKnown RBP11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 IL7RP16871 459 aa11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 MDH2P40926 338 aaKnown RBP11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 TNFAIP6P98066 277 aaPredicted RBP11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 SYPL1Q16563 259 aa11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 ZNF718Q3SXZ3 478 aa11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 TTMPQ5BVD1 217 aa11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 PIWIL3Q7Z3Z3 882 aaKnown RBP11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 UEVLDQ8IX04 471 aa11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 FITM2Q8N6M3 262 aa11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 C1orf50Q9BV19 199 aa11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 FUT8Q9BYC5 575 aa11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 DPY30Q9C005 99 aa11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 SLC38A1Q9H2H9 487 aa11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 RNF121Q9H920 327 aa11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 FN3KRPQ9HA64 309 aa11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 ZNF180Q9UJW8 692 aa11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 FOXJ3Q9UPW0 622 aa11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 UTP11Q9Y3A2 253 aaKnown RBP11.38□□□□□ -0.59
EXOSC3-207ENST00000490516 A0A096LPI6 279 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 A0A0U1RQK1 487 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 CENPVL3A0A0U1RRI6 287 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 MS4A18H0YCH9 400 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 AZIN1O14977 448 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 ZNF205O95201 554 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 RPS4Y1P22090 263 aaKnown RBP11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 UQCRC2P22695 453 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 GRPRP30550 384 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 COPZ1P61923 177 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 DOC2BQ14184 412 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 SMU1Q2TAY7 513 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 PGS1Q32NB8 556 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 MS4A18Q3C1V0 323 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 NRN1LQ496H8 165 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 CFAP157Q5JU67 520 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 OR4F3Q6IEY1 312 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 H1FNTQ75WM6 255 aaPredicted RBP11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 SNX32Q86XE0 403 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 KLBQ86Z14 1044 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 RIMKLAQ8IXN7 391 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 ZNF440Q8IYI8 595 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 ZNF101Q8IZC7 436 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 OR1J2Q8NGS2 313 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 TAAR8Q969N4 342 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 TMEM165Q9HC07 324 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 ACOXLQ9NUZ1 547 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 EMCNQ9ULC0 261 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 ZDHHC8Q9ULC8 765 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 SIGLEC9Q9Y336 463 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 DNAJC15Q9Y5T4 150 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 SAR1BQ9Y6B6 198 aa11.37□□□□□ -0.59
EXOSC3-207ENST00000490516 LOC102725191A0A1B0GVB3 256 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 HMGN4O00479 90 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 MGRN1O60291 552 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 FZD7O75084 574 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 PEX11AO75192 247 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 MYL2P10916 166 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 CCNOP22674 350 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 GNA13Q14344 377 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 SLC35E4Q6ICL7 350 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 TMEM53Q6P2H8 277 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 NHLRC1Q6VVB1 395 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 ZYG11AQ6WRX3 759 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 WDR88Q6ZMY6 472 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 RNF165Q6ZSG1 346 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 LDLRAD3Q86YD5 345 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 MUC20Q8N307 709 aaPredicted RBP11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 OR4A15Q8NGL6 344 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 SLC25A40Q8TBP6 338 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 KLF14Q8TD94 323 aaPredicted RBP11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 GATAD2BQ8WXI9 593 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 CCDC126Q96EE4 140 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 NAPGQ99747 312 aaPredicted RBP11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 CDADC1Q9BWV3 514 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 OR2J1Q9GZK6 312 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 LRMDAQ9H2I8 198 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 C1orf198Q9H425 327 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms