RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 FAM86B1Q8N7N1 296 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 ADPRHL1Q8NDY3 354 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 PIK3C3Q8NEB9 887 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 NUP37Q8NFH4 326 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 OR6S1Q8NH40 331 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 TMEM255BQ8WV15 326 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 FBXO17Q96EF6 278 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 MPP4Q96JB8 637 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 REPIN1Q9BWE0 567 aaKnown RBP9.02□□□□□ -0.97
TTC28-207ENST00000490475 ZNF442Q9H7R0 627 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 GORASP2Q9H8Y8 452 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 MEPEQ9NQ76 525 aaPredicted RBP9.02□□□□□ -0.97
TTC28-207ENST00000490475 CA10Q9NS85 328 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 NDE1Q9NXR1 346 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 NKX1-2Q9UD57 310 aaPredicted RBP9.02□□□□□ -0.97
TTC28-207ENST00000490475 RPS6KA6Q9UK32 745 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 KCNS2Q9ULS6 477 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 A4GNTQ9UNA3 340 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 CORINQ9Y5Q5 1042 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 IGHV1-18A0A0C4DH31 117 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 LMX1BO60663 402 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 FZD7O75084 574 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 IGKV3-15P01624 115 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 IGLV1-44P01699 117 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 HLA-DOBP13765 273 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 CBR1P16152 277 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 SELENOPP49908 381 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 UGT2B15P54855 530 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 IL1RL1Q01638 556 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 ROR2Q01974 943 aaKnown RBP9.01□□□□□ -0.97
TTC28-207ENST00000490475 NAAAQ02083 359 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 LGALS3BPQ08380 585 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 PMS2P3Q13401 168 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 FXNQ16595 210 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 HIKESHIQ53FT3 197 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 IFI44LQ53G44 452 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 PFN4Q8NHR9 129 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 NEU4Q8WWR8 484 aaPredicted RBP9.01□□□□□ -0.97
TTC28-207ENST00000490475 GEMIN6Q8WXD5 167 aaKnown RBP9.01□□□□□ -0.97
TTC28-207ENST00000490475 BCL2L2Q92843 193 aaPredicted RBP9.01□□□□□ -0.97
TTC28-207ENST00000490475 ALKBH3Q96Q83 286 aaPredicted RBP9.01□□□□□ -0.97
TTC28-207ENST00000490475 ZNF184Q99676 751 aaPredicted RBP9.01□□□□□ -0.97
TTC28-207ENST00000490475 SH3GL3Q99963 347 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 ZNF426Q9BUY5 554 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 POLR2J2Q9GZM3 115 aaKnown RBP9.01□□□□□ -0.97
TTC28-207ENST00000490475 POLR2J3Q9H1A7 115 aaKnown RBP9.01□□□□□ -0.97
TTC28-207ENST00000490475 B3GAT2Q9NPZ5 323 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 B3GAT1Q9P2W7 334 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 FBXL3Q9UKT7 428 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 SPEF1Q9Y4P9 236 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 V9GYQ6 96 aa9.01□□□□□ -0.97
TTC28-207ENST00000490475 VWC2LB2RUY7 222 aa9□□□□□ -0.97
TTC28-207ENST00000490475 PLPP3O14495 311 aa9□□□□□ -0.97
TTC28-207ENST00000490475 ARPC2O15144 300 aa9□□□□□ -0.97
TTC28-207ENST00000490475 GPRIN2O60269 458 aa9□□□□□ -0.97
TTC28-207ENST00000490475 MT-ND1P03886 318 aa9□□□□□ -0.97
TTC28-207ENST00000490475 AHCYP23526 432 aa9□□□□□ -0.97
TTC28-207ENST00000490475 NR4A2P43354 598 aa9□□□□□ -0.97
TTC28-207ENST00000490475 IDH3GP51553 393 aaPredicted RBP9□□□□□ -0.97
TTC28-207ENST00000490475 CLDN17P56750 224 aa9□□□□□ -0.97
TTC28-207ENST00000490475 MS4A2Q01362 244 aa9□□□□□ -0.97
TTC28-207ENST00000490475 POU3F1Q03052 451 aaPredicted RBP9□□□□□ -0.97
TTC28-207ENST00000490475 RCN1Q15293 331 aa9□□□□□ -0.97
TTC28-207ENST00000490475 ZNF74Q16587 644 aa9□□□□□ -0.97
TTC28-207ENST00000490475 TBPL2Q6SJ96 375 aa9□□□□□ -0.97
TTC28-207ENST00000490475 NHLRC1Q6VVB1 395 aa9□□□□□ -0.97
TTC28-207ENST00000490475 CYP2R1Q6VVX0 501 aa9□□□□□ -0.97
TTC28-207ENST00000490475 SCAIQ8N9R8 606 aa9□□□□□ -0.97
TTC28-207ENST00000490475 TMEM239Q8WW34 195 aa9□□□□□ -0.97
TTC28-207ENST00000490475 NANOS1Q8WY41 292 aaKnown RBP9□□□□□ -0.97
TTC28-207ENST00000490475 PYURFQ96I23 114 aa9□□□□□ -0.97
TTC28-207ENST00000490475 TXNDC15Q96J42 360 aa9□□□□□ -0.97
TTC28-207ENST00000490475 CLPTM1LQ96KA5 538 aa9□□□□□ -0.97
TTC28-207ENST00000490475 C7orf34Q96L11 122 aa9□□□□□ -0.97
TTC28-207ENST00000490475 LRR1Q96L50 414 aa9□□□□□ -0.97
TTC28-207ENST00000490475 VRK1Q99986 396 aaPredicted RBP9□□□□□ -0.97
TTC28-207ENST00000490475 FNDC11Q9BVV2 318 aa9□□□□□ -0.97
TTC28-207ENST00000490475 ASPNQ9BXN1 380 aa9□□□□□ -0.97
TTC28-207ENST00000490475 PLK3Q9H4B4 646 aa9□□□□□ -0.97
TTC28-207ENST00000490475 MAN2C1Q9NTJ4 1040 aa9□□□□□ -0.97
TTC28-207ENST00000490475 C20orf141Q9NUB4 165 aa9□□□□□ -0.97
TTC28-207ENST00000490475 TAS2R5Q9NYW4 299 aa9□□□□□ -0.97
TTC28-207ENST00000490475 NDUFA13Q9P0J0 144 aa9□□□□□ -0.97
TTC28-207ENST00000490475 MALRD1Q5VYJ5 2156 aa9□□□□□ -0.97
TTC28-207ENST00000490475 FBN1P35555 2871 aaKnown RBP9□□□□□ -0.97
TTC28-207ENST00000490475 ZNF99A8MXY4 864 aaPredicted RBP8.99□□□□□ -0.97
TTC28-207ENST00000490475 C11orf98E9PRG8 122 aa8.99□□□□□ -0.97
TTC28-207ENST00000490475 hCG_2039718K7EN88 272 aa8.99□□□□□ -0.97
TTC28-207ENST00000490475 PIP5K1CO60331 668 aa8.99□□□□□ -0.97
TTC28-207ENST00000490475 SERPINI2O75830 405 aa8.99□□□□□ -0.97
TTC28-207ENST00000490475 ZNF432O94892 652 aa8.99□□□□□ -0.97
TTC28-207ENST00000490475 DIRAS1O95057 198 aa8.99□□□□□ -0.97
TTC28-207ENST00000490475 PRSS23O95084 383 aa8.99□□□□□ -0.97
TTC28-207ENST00000490475 MT-ATP6P00846 226 aa8.99□□□□□ -0.97
TTC28-207ENST00000490475 HIST1H2ABP04908 130 aa8.99□□□□□ -0.97
TTC28-207ENST00000490475 OR4A8P0C604 315 aa8.99□□□□□ -0.97
TTC28-207ENST00000490475 CECR9P0C854 216 aa8.99□□□□□ -0.97
TTC28-207ENST00000490475 IGHV4-31P0DP07 118 aa8.99□□□□□ -0.97
TTC28-207ENST00000490475 THRBP10828 461 aa8.99□□□□□ -0.97
TTC28-207ENST00000490475 APEHP13798 732 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms