RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 XRCC3O43542 346 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 PRAMEF11O60813 436 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 CTNSO60931 367 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 GLSO94925 669 aaPredicted RBP4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SLC25A14O95258 325 aaPredicted RBP4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 NSA2O95478 260 aaKnown RBP4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 PRAMEF12O95522 483 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 PLGP00747 810 aaPredicted RBP4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SOD2P04179 222 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 AKAIN1P0CW23 69 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 ALPPL2P10696 532 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 PF4V1P10720 104 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 TYMPP19971 482 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 AOAHP28039 575 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 CD80P33681 288 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 NSG1P42857 185 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SLC6A12P48065 614 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SULT1A1P50225 295 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 TDGF1P3P51864 188 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SUCLG1P53597 346 aaKnown RBP4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 YBEYP58557 167 aaPredicted RBP4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 TAS2R20P59543 309 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 LILRA4P59901 499 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SNRPNP63162 240 aaKnown RBP4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SSBP1Q04837 148 aaKnown RBP4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 PRKCZQ05513 592 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 CHIT1Q13231 466 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 DOC2AQ14183 400 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 JOSD1Q15040 202 aaPredicted RBP4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SYPL1Q16563 259 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF750Q32MQ0 723 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 PCGF3Q3KNV8 242 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 C9orf64Q5T6V5 341 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 RIPPLY2Q5TAB7 128 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SDHAF4Q5VUM1 108 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 WSCD1Q658N2 575 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 FAAP20Q6NZ36 180 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 TNFAIP8L2Q6P589 184 aaPredicted RBP4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 FCRLAQ7L513 359 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 C5orf24Q7Z6I8 188 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 RABEPKQ7Z6M1 372 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 MRPL52Q86TS9 123 aaKnown RBP4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 CPOQ8IVL8 374 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 PRSS58Q8IYP2 241 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF664Q8N3J9 261 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SIRT6Q8N6T7 355 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF283Q8N7M2 679 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 KREMEN2Q8NCW0 462 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 OR4K1Q8NGD4 311 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 OR4D11Q8NGI4 311 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 OR51G2Q8NGK0 314 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 OR13C8Q8NGS7 320 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 OR13D1Q8NGV5 346 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 RNASEH2CQ8TDP1 164 aaKnown RBP4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SLC38A5Q8WUX1 472 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 PPP1R1CQ8WVI7 109 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 TMED6Q8WW62 240 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 HPSE2Q8WWQ2 592 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 MR1Q95460 341 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 PGLYRP3Q96LB9 341 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 CAMK1GQ96NX5 476 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 IP6K3Q96PC2 410 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 F2RL3Q96RI0 385 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 KRTAP4-12Q9BQ66 201 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SNHG12Q9BXW3 62 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 RSPO3Q9BXY4 272 aaPredicted RBP4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 ACTRT3Q9BYD9 372 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 KRTAP9-4Q9BYQ2 154 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 ACTR3CQ9C0K3 210 aaPredicted RBP4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 LINC00597Q9H2U6 94 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 GAL3ST2Q9H3Q3 398 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SMOC1Q9H4F8 434 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 DBNDD1Q9H9R9 158 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 TRPV4Q9HBA0 871 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 IL21RQ9HBE5 538 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 CSNK1G1Q9HCP0 422 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 PARP11Q9NR21 331 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 MARCH5Q9NX47 278 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 OBP2AQ9NY56 170 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 AK6Q9Y3D8 172 aaKnown RBP4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 ADAM18Q9Y3Q7 739 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 MYO10Q9HD67 2058 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 LTBP1Q14766 1721 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 CKAP5Q14008 2032 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 A0A1W2PPQ1 181 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 CPED1A4D0V7 1026 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 ANTXRLA6NF34 631 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 TRDCB7Z8K6 153 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 C9J4A7 227 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SOCS6O14544 535 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SYT7O43581 403 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 NARSO43776 548 aaKnown RBP4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 CIDEAO60543 219 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 PRAMEF4O60810 478 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 ADAP1O75689 374 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 GJB3O75712 270 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 OR2C1O95371 312 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 ARIH2O95376 493 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 AIFM1O95831 613 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms