RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 PMS2P2O95744 297 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 AVPI1Q5T686 147 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 RHOUQ7L0Q8 258 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 VASH1Q7L8A9 365 aaPredicted RBP16.2■□□□□ 0.18
NPHP4-209ENST00000489180 PDXPQ96GD0 296 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 IKZF5Q9H5V7 419 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 SDHAF2Q9NX18 166 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 TCRBV5S2A0A599 114 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 SULT1B1O43704 296 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 CST5P28325 142 aaPredicted RBP16.2■□□□□ 0.18
NPHP4-209ENST00000489180 MAGEB1P43366 347 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 SLC35A1P78382 337 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 OTUD1Q5VV17 481 aaPredicted RBP16.2■□□□□ 0.18
NPHP4-209ENST00000489180 CD276Q5ZPR3 534 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 PAPD4Q6PIY7 484 aaKnown RBP16.2■□□□□ 0.18
NPHP4-209ENST00000489180 TMEM179BQ7Z7N9 219 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 OR52I2Q8NH67 350 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 DAZAP1Q96EP5 407 aaKnown RBP16.2■□□□□ 0.18
NPHP4-209ENST00000489180 SLC6A18Q96N87 628 aa16.2■□□□□ 0.18
NPHP4-209ENST00000489180 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.2■□□□□ 0.18
NPHP4-209ENST00000489180 IGHV3-20A0A0C4DH32 117 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 TGM6O95932 706 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 NDUFA6P56556 154 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 YPEL5P62699 121 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 TLE4Q04727 773 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 ANGPTL5Q86XS5 388 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 CTRCQ99895 268 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 OR52A5Q9H2C5 316 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 BOKQ9UMX3 212 aaPredicted RBP16.19■□□□□ 0.18
NPHP4-209ENST00000489180 OXA1LQ15070 435 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 ATOH1Q92858 354 aaPredicted RBP16.19■□□□□ 0.18
NPHP4-209ENST00000489180 SEMA6CQ9H3T2 930 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 ANKRD10Q9NXR5 420 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 PIGLQ9Y2B2 252 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 RAB27BO00194 218 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 BCAT2O15382 392 aaPredicted RBP16.19■□□□□ 0.18
NPHP4-209ENST00000489180 CMIPQ8IY22 773 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 HRASLSQ9HDD0 168 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 RAB22AQ9UL26 194 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 AGAP14A8MT82 685 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 ATP6V1G2-DDX39BF2Z307 99 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 OR13C7P0DN81 318 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 AKR1C1Q04828 323 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 C17orf67Q0P5P2 114 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 FAAP20Q6NZ36 180 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 GLCCI1Q86VQ1 547 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 OR13C5Q8NGS8 318 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 SLC35A4Q96G79 324 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 RNF170Q96K19 258 aa16.19■□□□□ 0.18
NPHP4-209ENST00000489180 RNF212BA8MTL3 300 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 SCAF4O95104 1147 aaKnown RBP16.18■□□□□ 0.18
NPHP4-209ENST00000489180 PTAFRP25105 342 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 SSR4P51571 173 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 EPHA5P54756 1037 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 DEFA6Q01524 100 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 ZNF578Q96N58 590 aaPredicted RBP16.18■□□□□ 0.18
NPHP4-209ENST00000489180 TAS2R4Q9NYW5 299 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 A0A087WUU8 490 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 OR10K2Q6IF99 312 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 UPRTQ96BW1 309 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 SLC46A1Q96NT5 459 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 EPHX3Q9H6B9 360 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 SLC39A9Q9NUM3 307 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 AKR7A3O95154 331 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 TMEM52BQ4KMG9 183 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 SOHLH1Q5JUK2 328 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 TMEM200AQ86VY9 491 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 GRAMD2AQ8IUY3 354 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 OR6M1Q8NGM8 313 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 SCARB1Q8WTV0 552 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 MS4A6EQ96DS6 147 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 CHD4Q14839 1912 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 A0A0B4J203 849 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 HRO43593 1189 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 ARRB2P32121 409 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 GLYR1Q49A26 553 aaPredicted RBP16.18■□□□□ 0.18
NPHP4-209ENST00000489180 SLC35D3Q5M8T2 416 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 FAM122CQ6P4D5 195 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 WBP2Q969T9 261 aa16.18■□□□□ 0.18
NPHP4-209ENST00000489180 A0A0A6YYJ9 748 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 TMEM129A0AVI4 362 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 CPEP16870 476 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 UBE2MP61081 183 aaKnown RBP16.17■□□□□ 0.18
NPHP4-209ENST00000489180 DCDP81605 110 aaKnown RBP16.17■□□□□ 0.18
NPHP4-209ENST00000489180 MRPS21P82921 87 aaKnown RBP16.17■□□□□ 0.18
NPHP4-209ENST00000489180 MZT1Q08AG7 82 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 CATR1Q13166 79 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 C1orf140Q5VVS0 124 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 FAM71CQ8NEG0 241 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 OR11A1Q9GZK7 315 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 PATZ1Q9HBE1 687 aaKnown RBP16.17■□□□□ 0.18
NPHP4-209ENST00000489180 ANKRD34BA5PLL1 514 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 TIMM8AO60220 97 aaPredicted RBP16.17■□□□□ 0.18
NPHP4-209ENST00000489180 CTNSO60931 367 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 ZIC2O95409 532 aaPredicted RBP16.17■□□□□ 0.18
NPHP4-209ENST00000489180 SBK2P0C263 348 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 PIPP12273 146 aaPredicted RBP16.17■□□□□ 0.18
NPHP4-209ENST00000489180 BCKDHBP21953 392 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 RDH10Q8IZV5 341 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 OR13H1Q8NG92 308 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms