RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 BHLHE22Q8NFJ8 381 aaPredicted RBP13.66□□□□□ -0.22
USP48-210ENST00000489108 DCLRE1CQ96SD1 692 aaKnown RBP13.66□□□□□ -0.22
USP48-210ENST00000489108 CITED1Q99966 193 aa13.66□□□□□ -0.22
USP48-210ENST00000489108 MRI1Q9BV20 369 aa13.66□□□□□ -0.22
USP48-210ENST00000489108 BCL2L14Q9BZR8 327 aa13.66□□□□□ -0.22
USP48-210ENST00000489108 PPCSQ9HAB8 311 aa13.66□□□□□ -0.22
USP48-210ENST00000489108 C12orf10Q9HB07 376 aa13.66□□□□□ -0.22
USP48-210ENST00000489108 NPHS2Q9NP85 383 aa13.66□□□□□ -0.22
USP48-210ENST00000489108 TCF7L2Q9NQB0 619 aa13.66□□□□□ -0.22
USP48-210ENST00000489108 SLC6A13Q9NSD5 602 aa13.66□□□□□ -0.22
USP48-210ENST00000489108 EGFL7Q9UHF1 273 aa13.66□□□□□ -0.22
USP48-210ENST00000489108 POLR3KQ9Y2Y1 108 aaPredicted RBP13.66□□□□□ -0.22
USP48-210ENST00000489108 IFT52Q9Y366 437 aa13.66□□□□□ -0.22
USP48-210ENST00000489108 TANC2Q9HCD6 1990 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 NBEAL2Q6ZNJ1 2754 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 A0A0G2JPF8 293 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 A0A1B0GWA3 101 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 TLDC2A0PJX2 215 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 HNRNPCL2B2RXH8 293 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 HNRNPCL3B7ZW38 293 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 M0QZ24 198 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 TM9SF1O15321 606 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 HNRNPCL1O60812 293 aaKnown RBP13.65□□□□□ -0.22
USP48-210ENST00000489108 ALX3O95076 343 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 BGLAPP02818 100 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 BPGMP07738 259 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 HNRNPCL4P0DMR1 293 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 AHCYP23526 432 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 CRATP43155 626 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 SEC61A1P61619 476 aaKnown RBP13.65□□□□□ -0.22
USP48-210ENST00000489108 TBC1D28Q2M2D7 210 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 FBLN7Q53RD9 439 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 TMEM255AQ5JRV8 349 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 BRICD5Q6PL45 260 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 ZNF781Q8N8C0 355 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 OR52E2Q8NGJ4 325 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 OR1J1Q8NGS3 322 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 TMEM54Q969K7 222 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 TMEM19Q96HH6 336 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 ASPNQ9BXN1 380 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 CACYBPQ9HB71 228 aaKnown RBP13.65□□□□□ -0.22
USP48-210ENST00000489108 BEX1Q9HBH7 125 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 DCAF16Q9NXF7 216 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 NPTNQ9Y639 398 aa13.65□□□□□ -0.22
USP48-210ENST00000489108 A0A1B0GUS0 222 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 MDFIC2A0A1B0GVS7 189 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 FAM181BA6NEQ2 426 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 LRRN3E7EW58 273 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 MFN2O95140 757 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 SNAP29O95721 258 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 IGHV2-70P01814 119 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 LBPP18428 481 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 HTR2AP28223 471 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 SLC6A9P48067 706 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 MMP15P51511 669 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 BIDP55957 195 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 DSTNP60981 165 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 PUDPQ08623 228 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 ALG10BQ5I7T1 473 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 TMEM53Q6P2H8 277 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 LRFN4Q6PJG9 635 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 PXKQ7Z7A4 578 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 SCAIQ8N9R8 606 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 OR1J2Q8NGS2 313 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 OR6S1Q8NH40 331 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 C16orf45Q96MC5 204 aaPredicted RBP13.64□□□□□ -0.23
USP48-210ENST00000489108 MOGAT1Q96PD6 335 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 RSPO3Q9BXY4 272 aaPredicted RBP13.64□□□□□ -0.23
USP48-210ENST00000489108 PATZ1Q9HBE1 687 aaKnown RBP13.64□□□□□ -0.23
USP48-210ENST00000489108 TMEM38BQ9NVV0 291 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 GLTPQ9NZD2 209 aa13.64□□□□□ -0.23
USP48-210ENST00000489108 ZSCAN5BA6NJL1 495 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 PLPP3O14495 311 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 RFXANKO14593 260 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 TIMM23O14925 209 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 HOXA3O43365 443 aaPredicted RBP13.63□□□□□ -0.23
USP48-210ENST00000489108 PTHP01270 115 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 CD80P33681 288 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 MPV17P39210 176 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 KRTAP10-3P60369 221 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 PAX8Q06710 450 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 ZNF362Q5T0B9 420 aaPredicted RBP13.63□□□□□ -0.23
USP48-210ENST00000489108 SPATA46Q5T0L3 261 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 THEM4Q5T1C6 240 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 OLFML2AQ68BL7 652 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 C9orf139Q6ZV77 190 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 PARP8Q8N3A8 854 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 LSMEM1Q8N8F7 131 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 OR4K5Q8NGD3 323 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 OR4F5Q8NH21 305 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 DNAJA4Q8WW22 397 aaPredicted RBP13.63□□□□□ -0.23
USP48-210ENST00000489108 GEMIN6Q8WXD5 167 aaKnown RBP13.63□□□□□ -0.23
USP48-210ENST00000489108 SLC35B4Q969S0 331 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 RBM4BQ9BQ04 359 aaKnown RBP13.63□□□□□ -0.23
USP48-210ENST00000489108 RHOXF2Q9BQY4 288 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 EGLN1Q9GZT9 426 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 LRMDAQ9H2I8 198 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 C1orf198Q9H425 327 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 TNFRSF19Q9NS68 423 aa13.63□□□□□ -0.23
USP48-210ENST00000489108 MRPL39Q9NYK5 338 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms