RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 ALG12Q9BV10 488 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 NGBQ9NPG2 151 aa13.84□□□□□ -0.19
C9orf3-219ENST00000488186 FREM1Q5H8C1 2179 aa13.83□□□□□ -0.19
C9orf3-219ENST00000488186 PDLIM1O00151 329 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 SOCS2O14508 198 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 IMPA2O14732 288 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 DHHO43323 396 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 IDH3BO43837 385 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 SOX14O95416 240 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 ZNF26P17031 533 aaPredicted RBP13.83□□□□□ -0.2
C9orf3-219ENST00000488186 UBE2NP61088 152 aaKnown RBP13.83□□□□□ -0.2
C9orf3-219ENST00000488186 ARF1P84077 181 aaKnown RBP13.83□□□□□ -0.2
C9orf3-219ENST00000488186 KRR1Q13601 381 aaKnown RBP13.83□□□□□ -0.2
C9orf3-219ENST00000488186 GABRA6Q16445 453 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 TIMM23BQ5SRD1 257 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 THEM4Q5T1C6 240 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 ANKRD16Q6P6B7 361 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 CD300LDQ6UXZ3 194 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 LINGO2Q7L985 606 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 SSX8Q7RTT4 187 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 WFDC8Q8IUA0 241 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 WDFY1Q8IWB7 410 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 OR1K1Q8NGR3 316 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 OR52N5Q8NH56 324 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 MAGEE2Q8TD90 523 aaPredicted RBP13.83□□□□□ -0.2
C9orf3-219ENST00000488186 DNAJC9Q8WXX5 260 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 HDAC2Q92769 488 aaKnown RBP13.83□□□□□ -0.2
C9orf3-219ENST00000488186 MCHR2Q969V1 340 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 MARVELD3Q96A59 401 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 RASD2Q96D21 266 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 MUS81Q96NY9 551 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 PKP2Q99959 881 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 TSSK6Q9BXA6 273 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 TEX12Q9BXU0 123 aa13.83□□□□□ -0.2
C9orf3-219ENST00000488186 MRPL13Q9BYD1 178 aaKnown RBP13.83□□□□□ -0.2
C9orf3-219ENST00000488186 MAGED1Q9Y5V3 778 aaPredicted RBP13.83□□□□□ -0.2
C9orf3-219ENST00000488186 DCHS2Q6V1P9 2916 aa13.82□□□□□ -0.2
C9orf3-219ENST00000488186 A0A096LPE4 126 aa13.82□□□□□ -0.2
C9orf3-219ENST00000488186 A0A1W2PPZ6 126 aa13.82□□□□□ -0.2
C9orf3-219ENST00000488186 SAC3D1A6NKF1 404 aa13.82□□□□□ -0.2
C9orf3-219ENST00000488186 OR5H1A6NKK0 313 aa13.82□□□□□ -0.2
C9orf3-219ENST00000488186 ZNF99A8MXY4 864 aaPredicted RBP13.82□□□□□ -0.2
C9orf3-219ENST00000488186 WNT11O96014 354 aa13.82□□□□□ -0.2
C9orf3-219ENST00000488186 RENP00797 406 aa13.82□□□□□ -0.2
C9orf3-219ENST00000488186 APEHP13798 732 aaKnown RBP13.82□□□□□ -0.2
C9orf3-219ENST00000488186 CCKARP32238 428 aa13.82□□□□□ -0.2
C9orf3-219ENST00000488186 CAPZA2P47755 286 aa13.82□□□□□ -0.2
C9orf3-219ENST00000488186 FXYD6P3P58550 94 aa13.82□□□□□ -0.2
C9orf3-219ENST00000488186 PPA1Q15181 289 aa13.82□□□□□ -0.2
C9orf3-219ENST00000488186 ZNF787Q6DD87 383 aa13.82□□□□□ -0.2
C9orf3-219ENST00000488186 ZNF813Q6ZN06 617 aa13.82□□□□□ -0.2
C9orf3-219ENST00000488186 ZNF771Q7L3S4 317 aaPredicted RBP13.82□□□□□ -0.2
C9orf3-219ENST00000488186 C17orf78Q8N4C9 275 aa13.82□□□□□ -0.2
C9orf3-219ENST00000488186 CLDN22Q8N7P3 220 aa13.82□□□□□ -0.2
C9orf3-219ENST00000488186 OR2T33Q8NG76 320 aa13.82□□□□□ -0.2
C9orf3-219ENST00000488186 ZNF519Q8TB69 540 aa13.82□□□□□ -0.2
C9orf3-219ENST00000488186 NSMAFQ92636 917 aa13.82□□□□□ -0.2
C9orf3-219ENST00000488186 RERGLQ9H628 205 aa13.82□□□□□ -0.2
C9orf3-219ENST00000488186 PAPOLBQ9NRJ5 636 aaKnown RBP13.82□□□□□ -0.2
C9orf3-219ENST00000488186 IL20Q9NYY1 176 aa13.82□□□□□ -0.2
C9orf3-219ENST00000488186 BAIAP2Q9UQB8 552 aa13.82□□□□□ -0.2
C9orf3-219ENST00000488186 AMDHD2Q9Y303 409 aa13.82□□□□□ -0.2
C9orf3-219ENST00000488186 APCP25054 2843 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 A0A1W2PR80 420 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 H3BNX3 289 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 H7C1C5 153 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 ARPC3O15145 178 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 AHCYL1O43865 530 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 GOSR1O95249 250 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 FARS2O95363 451 aaKnown RBP13.81□□□□□ -0.2
C9orf3-219ENST00000488186 OSMP13725 252 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 LCN6P62502 163 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 TAB1Q15750 504 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 SLC36A3Q495N2 470 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 HIKESHIQ53FT3 197 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 SLC35F1Q5T1Q4 408 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 LEG1Q6P5S2 330 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 LRFN4Q6PJG9 635 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 KLHL17Q6TDP4 642 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 FAM122BQ7Z309 247 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 ADCK1Q86TW2 530 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 BCL2L2Q92843 193 aaPredicted RBP13.81□□□□□ -0.2
C9orf3-219ENST00000488186 ZNF837Q96EG3 531 aaPredicted RBP13.81□□□□□ -0.2
C9orf3-219ENST00000488186 KCNK17Q96T54 332 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 FOXB1Q99853 325 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 KCNN2Q9H2S1 579 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 SLC17A5Q9NRA2 495 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 KRT84Q9NSB2 600 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 OAZ3Q9UMX2 235 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 ABCA12Q86UK0 2595 aa13.81□□□□□ -0.2
C9orf3-219ENST00000488186 PRSS37A4D1T9 235 aa13.8□□□□□ -0.2
C9orf3-219ENST00000488186 SEC14L2O76054 403 aa13.8□□□□□ -0.2
C9orf3-219ENST00000488186 SLC2A10O95528 541 aa13.8□□□□□ -0.2
C9orf3-219ENST00000488186 TXNDC12O95881 172 aa13.8□□□□□ -0.2
C9orf3-219ENST00000488186 IGFBP1P08833 259 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-219ENST00000488186 HOXB1P14653 301 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-219ENST00000488186 SSTR2P30874 369 aa13.8□□□□□ -0.2
C9orf3-219ENST00000488186 CENPAP49450 140 aa13.8□□□□□ -0.2
C9orf3-219ENST00000488186 DAPP51397 102 aa13.8□□□□□ -0.2
C9orf3-219ENST00000488186 HIST3H3Q16695 136 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms