RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 NPFFR2Q9Y5X5 522 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 ARPC4-TTLL3A0A0A6YYG9 625 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 ADAM11O75078 769 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 APOC3P02656 99 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 IGKV3-11P04433 115 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 PSMB1P20618 241 aaKnown RBP12.43□□□□□ -0.42
COPS7B-221ENST00000488111 IFNGR2P38484 337 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 GDNFP39905 211 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 MAP3K8P41279 467 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 CCR9P51686 369 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 GPR85P60893 370 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 GABREP78334 506 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 TRAM1Q15629 374 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 PDSS1Q5T2R2 415 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 NPSR1Q6W5P4 371 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 TMUB2Q71RG4 321 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 PXKQ7Z7A4 578 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 OR14A16Q8NHC5 309 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 CT55Q8WUE5 264 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 GAL3ST4Q96RP7 486 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 C12orf57Q99622 126 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 NRSN2Q9GZP1 204 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 FN3KQ9H479 309 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 DLL3Q9NYJ7 618 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 CDV3Q9UKY7 258 aaKnown RBP12.43□□□□□ -0.42
COPS7B-221ENST00000488111 NUP210LQ5VU65 1888 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 HMSDA8MTL9 139 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 SC5DO75845 299 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 IFI6P09912 130 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 CT45A8P0DMV1 189 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 CT45A9P0DMV2 189 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 SAGP10523 405 aaPredicted RBP12.43□□□□□ -0.42
COPS7B-221ENST00000488111 IFNGR1P15260 489 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 SEC61A1P61619 476 aaKnown RBP12.43□□□□□ -0.42
COPS7B-221ENST00000488111 GK2Q14410 553 aaPredicted RBP12.43□□□□□ -0.42
COPS7B-221ENST00000488111 ZNHIT3Q15649 155 aaPredicted RBP12.43□□□□□ -0.42
COPS7B-221ENST00000488111 CT45A2Q5DJT8 189 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 EXOSC6Q5RKV6 272 aaKnown RBP12.43□□□□□ -0.42
COPS7B-221ENST00000488111 DCST2Q5T1A1 773 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 HEPHL1Q6MZM0 1159 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 ZCCHC12Q6PEW1 402 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 PAPD4Q6PIY7 484 aaKnown RBP12.43□□□□□ -0.42
COPS7B-221ENST00000488111 GLDNQ6ZMI3 551 aaPredicted RBP12.43□□□□□ -0.42
COPS7B-221ENST00000488111 CPEB2Q7Z5Q1 589 aaKnown RBP12.43□□□□□ -0.42
COPS7B-221ENST00000488111 OR6V1Q8N148 313 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 SDF2Q99470 211 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 ALG8Q9BVK2 526 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 SLC38A1Q9H2H9 487 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 PLEKHA1Q9HB21 404 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 HRASLSQ9HDD0 168 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 EXOSC3Q9NQT5 275 aaKnown RBP12.43□□□□□ -0.42
COPS7B-221ENST00000488111 DUSP22Q9NRW4 184 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 COA4Q9NYJ1 87 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 ABRACLQ9P1F3 81 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 NXT1Q9UKK6 140 aaKnown RBP12.43□□□□□ -0.42
COPS7B-221ENST00000488111 FBXL3Q9UKT7 428 aa12.43□□□□□ -0.42
COPS7B-221ENST00000488111 NPIPA5A0A0B4J1W7 369 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 CDC14CA4D256 554 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 NPIPA7E9PJI5 369 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 SOCS6O14544 535 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 NKX2-2O95096 273 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 CH25HO95992 272 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 HPP00738 406 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 HIST1H2ABP04908 130 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 NPIPA8P0DM63 369 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 TBXA2RP21731 343 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 ATP6V1E1P36543 226 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 FGL1Q08830 312 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 ARHGAP11BQ3KRB8 267 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 SFRP4Q6FHJ7 346 aaPredicted RBP12.42□□□□□ -0.42
COPS7B-221ENST00000488111 OR5M10Q6IEU7 315 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 TMEM205Q6UW68 189 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 HIST3H2AQ7L7L0 130 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 CEACAM19Q7Z692 300 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 TEX19Q8NA77 164 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 OR5M9Q8NGP3 310 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 OR1N1Q8NGS0 311 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 OR5W2Q8NH69 310 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 HIST1H2ACQ93077 130 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 LMF1Q96S06 567 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 STACQ99469 402 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 WDR77Q9BQA1 342 aaPredicted RBP12.42□□□□□ -0.42
COPS7B-221ENST00000488111 SEC22CQ9BRL7 303 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 LMF2Q9BU23 707 aaKnown RBP12.42□□□□□ -0.42
COPS7B-221ENST00000488111 OR10A4Q9H209 315 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 AUNIPQ9H7T9 357 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 TRIM36Q9NQ86 728 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 CNIH4Q9P003 139 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 DCDC2BA2VCK2 349 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 NAP1L6A6NFF2 107 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 TEX46H3BTG2 121 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 LINC01387J3KSC0 135 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 PLPP2O43688 288 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 BRINP1O60477 761 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 AGR2O95994 175 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 RPL35P42766 123 aaKnown RBP12.42□□□□□ -0.42
COPS7B-221ENST00000488111 RAD52P43351 418 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 OMPP47874 163 aa12.42□□□□□ -0.42
COPS7B-221ENST00000488111 PSMA6P60900 246 aaKnown RBP12.42□□□□□ -0.42
COPS7B-221ENST00000488111 PGGHGQ32M88 737 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms