RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 RPS6KB2Q9UBS0 482 aa12.99□□□□□ -0.33
MCF2L-228ENST00000487354 SOX21Q9Y651 276 aaPredicted RBP12.99□□□□□ -0.33
MCF2L-228ENST00000487354 SLC22A23A1A5C7 686 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 ZSCAN5BA6NJL1 495 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 TRAPPC2LH3BP13 241 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 TM9SF1O15321 606 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 BIRC5O15392 142 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 SERPINI2O75830 405 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 OR8G3PP0DMU2 310 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 MDKP21741 143 aaPredicted RBP12.98□□□□□ -0.33
MCF2L-228ENST00000487354 BGNP21810 368 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 LSP1P33241 339 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 UCP2P55851 309 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 IL13RA1P78552 427 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 TEKQ02763 1124 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 PMS2P3Q13401 168 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 RGNQ15493 299 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 HFEQ30201 348 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 ULK3Q6PHR2 472 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 MIER2Q8N344 545 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 SYT14Q8NB59 555 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 GLB1L3Q8NCI6 653 aaPredicted RBP12.98□□□□□ -0.33
MCF2L-228ENST00000487354 BBS10Q8TAM1 723 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 POP5Q969H6 163 aaKnown RBP12.98□□□□□ -0.33
MCF2L-228ENST00000487354 WDR55Q9H6Y2 383 aaPredicted RBP12.98□□□□□ -0.33
MCF2L-228ENST00000487354 NPHS2Q9NP85 383 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 PLEK2Q9NYT0 353 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 GLTPQ9NZD2 209 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 ARMCX1Q9P291 453 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 PURGQ9UJV8 347 aaKnown RBP12.98□□□□□ -0.33
MCF2L-228ENST00000487354 NUP50Q9UKX7 468 aa12.98□□□□□ -0.33
MCF2L-228ENST00000487354 POLR3KQ9Y2Y1 108 aaPredicted RBP12.98□□□□□ -0.33
MCF2L-228ENST00000487354 ZNF726A6NNF4 738 aa12.97□□□□□ -0.33
MCF2L-228ENST00000487354 CLDN34H7C241 214 aa12.97□□□□□ -0.33
MCF2L-228ENST00000487354 IL6P05231 212 aa12.97□□□□□ -0.33
MCF2L-228ENST00000487354 LCKP06239 509 aa12.97□□□□□ -0.33
MCF2L-228ENST00000487354 MMP7P09237 267 aaPredicted RBP12.97□□□□□ -0.33
MCF2L-228ENST00000487354 EPHA3P29320 983 aa12.97□□□□□ -0.33
MCF2L-228ENST00000487354 MPV17P39210 176 aa12.97□□□□□ -0.33
MCF2L-228ENST00000487354 SEC61A1P61619 476 aaKnown RBP12.97□□□□□ -0.33
MCF2L-228ENST00000487354 SRSF4Q08170 494 aaKnown RBP12.97□□□□□ -0.33
MCF2L-228ENST00000487354 MPP2Q14168 576 aa12.97□□□□□ -0.33
MCF2L-228ENST00000487354 SLC9A3R2Q15599 337 aa12.97□□□□□ -0.33
MCF2L-228ENST00000487354 PDCD4Q53EL6 469 aaKnown RBP12.97□□□□□ -0.33
MCF2L-228ENST00000487354 FAM209AQ5JX71 171 aa12.97□□□□□ -0.33
MCF2L-228ENST00000487354 LEG1Q6P5S2 330 aa12.97□□□□□ -0.33
MCF2L-228ENST00000487354 DHRS4L2Q6PKH6 230 aa12.97□□□□□ -0.33
MCF2L-228ENST00000487354 RETREG3Q86VR2 466 aa12.97□□□□□ -0.33
MCF2L-228ENST00000487354 SNX32Q86XE0 403 aa12.97□□□□□ -0.33
MCF2L-228ENST00000487354 ZNF101Q8IZC7 436 aa12.97□□□□□ -0.33
MCF2L-228ENST00000487354 OR6X1Q8NH79 312 aa12.97□□□□□ -0.33
MCF2L-228ENST00000487354 RAB1CQ92928 201 aa12.97□□□□□ -0.33
MCF2L-228ENST00000487354 ELMOD3Q96FG2 381 aa12.97□□□□□ -0.33
MCF2L-228ENST00000487354 TIMD4Q96H15 378 aa12.97□□□□□ -0.33
MCF2L-228ENST00000487354 ASPNQ9BXN1 380 aa12.97□□□□□ -0.33
MCF2L-228ENST00000487354 PAIP1Q9H074 479 aaKnown RBP12.97□□□□□ -0.33
MCF2L-228ENST00000487354 CDH20Q9HBT6 801 aa12.97□□□□□ -0.33
MCF2L-228ENST00000487354 DECR2Q9NUI1 292 aa12.97□□□□□ -0.33
MCF2L-228ENST00000487354 THUMPD1Q9NXG2 353 aaKnown RBP12.97□□□□□ -0.33
MCF2L-228ENST00000487354 GPR160Q9UJ42 338 aa12.97□□□□□ -0.33
MCF2L-228ENST00000487354 POM121CA8CG34 1229 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 C11orf98E9PRG8 122 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 IGHV2-70P01814 119 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 PGA4P0DJD7 388 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 PGA3P0DJD8 388 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 ETS2P15036 469 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 ZNF12P17014 697 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 WNT5AP41221 380 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 ATP4BP51164 291 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 ZNF81P51508 661 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 BST1Q10588 318 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 ZNF154Q13106 437 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 BAMBIQ13145 260 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 OR1Q1Q15612 314 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 ARMCX4Q5H9R4 360 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 RBMS3Q6XE24 437 aaKnown RBP12.96□□□□□ -0.33
MCF2L-228ENST00000487354 LINC00114Q6XXX2 140 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 MSRB3Q8IXL7 192 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 CPEB3Q8NE35 698 aaKnown RBP12.96□□□□□ -0.33
MCF2L-228ENST00000487354 OR4K5Q8NGD3 323 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 OR9I1Q8NGQ6 314 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 IPCEF1Q8WWN9 437 aaPredicted RBP12.96□□□□□ -0.33
MCF2L-228ENST00000487354 C11orf40Q8WZ69 217 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 CCL17Q92583 94 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 TRIM44Q96DX7 344 aaPredicted RBP12.96□□□□□ -0.33
MCF2L-228ENST00000487354 SLC47A1Q96FL8 570 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 ZBTB18Q99592 522 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 TMEM43Q9BTV4 400 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 BCL2L14Q9BZR8 327 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 TAS2R5Q9NYW4 299 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 UBAP1Q9NZ09 502 aa12.96□□□□□ -0.33
MCF2L-228ENST00000487354 TESQ9UGI8 421 aaKnown RBP12.96□□□□□ -0.33
MCF2L-228ENST00000487354 DHHO43323 396 aa12.95□□□□□ -0.34
MCF2L-228ENST00000487354 SPRY3O43610 288 aa12.95□□□□□ -0.34
MCF2L-228ENST00000487354 IGHMP01871 453 aa12.95□□□□□ -0.34
MCF2L-228ENST00000487354 ADH4P08319 380 aa12.95□□□□□ -0.34
MCF2L-228ENST00000487354 AHCYP23526 432 aa12.95□□□□□ -0.34
MCF2L-228ENST00000487354 CDH12P55289 794 aa12.95□□□□□ -0.34
MCF2L-228ENST00000487354 SELENOVP59797 346 aa12.95□□□□□ -0.34
MCF2L-228ENST00000487354 MELKQ14680 651 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms