RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 ZNF704Q6ZNC4 412 aaPredicted RBP12.82□□□□□ -0.36
LIMS3-205ENST00000487150 CDH24Q86UP0 819 aa12.82□□□□□ -0.36
LIMS3-205ENST00000487150 AQP11Q8NBQ7 271 aa12.82□□□□□ -0.36
LIMS3-205ENST00000487150 OR10G2Q8NGC3 310 aa12.82□□□□□ -0.36
LIMS3-205ENST00000487150 KCNK17Q96T54 332 aa12.82□□□□□ -0.36
LIMS3-205ENST00000487150 TMEM204Q9BSN7 226 aa12.82□□□□□ -0.36
LIMS3-205ENST00000487150 DGCR6LQ9BY27 220 aa12.82□□□□□ -0.36
LIMS3-205ENST00000487150 KCNN2Q9H2S1 579 aa12.82□□□□□ -0.36
LIMS3-205ENST00000487150 OR52D1Q9H346 318 aa12.82□□□□□ -0.36
LIMS3-205ENST00000487150 ZNF556Q9HAH1 456 aa12.82□□□□□ -0.36
LIMS3-205ENST00000487150 NRIP3Q9NQ35 241 aa12.82□□□□□ -0.36
LIMS3-205ENST00000487150 CDH10Q9Y6N8 788 aa12.82□□□□□ -0.36
LIMS3-205ENST00000487150 U3KQV3 271 aa12.82□□□□□ -0.36
LIMS3-205ENST00000487150 MPDZO75970 2070 aa12.82□□□□□ -0.36
LIMS3-205ENST00000487150 NOTCH2Q04721 2471 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 ARPC3O15145 178 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 PTP4A3O75365 173 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 TXNDC12O95881 172 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 NOS3P29474 1203 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 CAPZA2P47755 286 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 FOXG1P55316 489 aaPredicted RBP12.81□□□□□ -0.36
LIMS3-205ENST00000487150 ERVK-25P63136 954 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 BSPH1Q075Z2 132 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 FHL1Q13642 323 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 RFX4Q33E94 735 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 ZNF770Q6IQ21 691 aaPredicted RBP12.81□□□□□ -0.36
LIMS3-205ENST00000487150 SEZ6L2Q6UXD5 910 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 PAMR1Q6UXH9 720 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 RASSF6Q6ZTQ3 369 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 FAM122BQ7Z309 247 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 IGFN1Q86VF2 1251 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 MEX3DQ86XN8 651 aaKnown RBP12.81□□□□□ -0.36
LIMS3-205ENST00000487150 WDR31Q8NA23 367 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 SYT14Q8NB59 555 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 IL17RDQ8NFM7 739 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 OR9Q2Q8NGE9 314 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 GIPC3Q8TF64 312 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 MCHR2Q969V1 340 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 NRBF2Q96F24 287 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 TSPAN32Q96QS1 320 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 SNX18Q96RF0 628 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 BDH2Q9BUT1 245 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 FAIMQ9NVQ4 179 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 ARMC1Q9NVT9 282 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 TMEM38BQ9NVV0 291 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 ZNF346Q9UL40 294 aaKnown RBP12.81□□□□□ -0.36
LIMS3-205ENST00000487150 BAIAP2Q9UQB8 552 aa12.81□□□□□ -0.36
LIMS3-205ENST00000487150 UTP20O75691 2785 aaKnown RBP12.8□□□□□ -0.36
LIMS3-205ENST00000487150 A0A096LPE4 126 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 TEX13CA0A0J9YWL9 993 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 A0A1W2PPZ6 126 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 PRSS37A4D1T9 235 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 M0R1B8 84 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 SIAH2O43255 324 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 RAB36O95755 333 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 B4GALT1P15291 398 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 FASP25445 335 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 CD40P25942 277 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 ZNF83P51522 516 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 MRPS34P82930 218 aaKnown RBP12.8□□□□□ -0.36
LIMS3-205ENST00000487150 GSG1Q2KHT4 349 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 SLC36A2Q495M3 483 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 ADAM5Q6NVV9 412 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 ZFP1Q6P2D0 407 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 CD300LDQ6UXZ3 194 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 C22orf34Q6ZV56 151 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 JAZF1Q86VZ6 243 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 SLC22A24Q8N4F4 322 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 HDAC2Q92769 488 aaKnown RBP12.8□□□□□ -0.36
LIMS3-205ENST00000487150 DUS3LQ96G46 650 aaKnown RBP12.8□□□□□ -0.36
LIMS3-205ENST00000487150 SLC38A2Q96QD8 506 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 WACQ9BTA9 647 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 IFT27Q9BW83 186 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 C1orf198Q9H425 327 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.8□□□□□ -0.36
LIMS3-205ENST00000487150 KIF17Q9P2E2 1029 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 CRNNQ9UBG3 495 aaPredicted RBP12.8□□□□□ -0.36
LIMS3-205ENST00000487150 ADAM18Q9Y3Q7 739 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 AP4S1Q9Y587 144 aa12.8□□□□□ -0.36
LIMS3-205ENST00000487150 ABCD4O14678 606 aa12.79□□□□□ -0.36
LIMS3-205ENST00000487150 HS3ST1O14792 307 aa12.79□□□□□ -0.36
LIMS3-205ENST00000487150 ARHGEF9O43307 516 aa12.79□□□□□ -0.36
LIMS3-205ENST00000487150 PTHP01270 115 aa12.79□□□□□ -0.36
LIMS3-205ENST00000487150 IGKV3-15P01624 115 aa12.79□□□□□ -0.36
LIMS3-205ENST00000487150 CRYAAP02489 173 aa12.79□□□□□ -0.36
LIMS3-205ENST00000487150 RAF1P04049 648 aa12.79□□□□□ -0.36
LIMS3-205ENST00000487150 ANXA8P13928 327 aa12.79□□□□□ -0.36
LIMS3-205ENST00000487150 CBR1P16152 277 aa12.79□□□□□ -0.36
LIMS3-205ENST00000487150 DNASE1P24855 282 aa12.79□□□□□ -0.36
LIMS3-205ENST00000487150 CRABP1P29762 137 aa12.79□□□□□ -0.36
LIMS3-205ENST00000487150 RUNX1T1Q06455 604 aa12.79□□□□□ -0.36
LIMS3-205ENST00000487150 KEAP1Q14145 624 aa12.79□□□□□ -0.36
LIMS3-205ENST00000487150 PHYHD1Q5SRE7 291 aa12.79□□□□□ -0.36
LIMS3-205ENST00000487150 LRFN4Q6PJG9 635 aa12.79□□□□□ -0.36
LIMS3-205ENST00000487150 SLC22A25Q6T423 547 aa12.79□□□□□ -0.36
LIMS3-205ENST00000487150 FBXW5Q969U6 566 aa12.79□□□□□ -0.36
LIMS3-205ENST00000487150 NMD3Q96D46 503 aaKnown RBP12.79□□□□□ -0.36
LIMS3-205ENST00000487150 ZNF837Q96EG3 531 aaPredicted RBP12.79□□□□□ -0.36
LIMS3-205ENST00000487150 Q96M85 177 aa12.79□□□□□ -0.36
LIMS3-205ENST00000487150 ERMAPQ96PL5 475 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms