RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 MGRN1O60291 552 aa2.55□□□□□ -2
LTN1-206ENST00000486427 SCGNO76038 276 aa2.55□□□□□ -2
LTN1-206ENST00000486427 IGHV1-8P0DP01 117 aa2.55□□□□□ -2
LTN1-206ENST00000486427 TCN2P20062 427 aa2.55□□□□□ -2
LTN1-206ENST00000486427 PSMA5P28066 241 aa2.55□□□□□ -2
LTN1-206ENST00000486427 FDFT1P37268 417 aa2.55□□□□□ -2
LTN1-206ENST00000486427 ATP1B3P54709 279 aa2.55□□□□□ -2
LTN1-206ENST00000486427 ERCC8Q13216 396 aa2.55□□□□□ -2
LTN1-206ENST00000486427 POU2AF1Q16633 256 aa2.55□□□□□ -2
LTN1-206ENST00000486427 DNLZQ5SXM8 178 aa2.55□□□□□ -2
LTN1-206ENST00000486427 ENPP6Q6UWR7 440 aa2.55□□□□□ -2
LTN1-206ENST00000486427 DHDDSQ86SQ9 333 aa2.55□□□□□ -2
LTN1-206ENST00000486427 OSR2Q8N2R0 312 aa2.55□□□□□ -2
LTN1-206ENST00000486427 RLN3Q8WXF3 142 aa2.55□□□□□ -2
LTN1-206ENST00000486427 RGP1Q92546 391 aaPredicted RBP2.55□□□□□ -2
LTN1-206ENST00000486427 TTC25Q96NG3 672 aa2.55□□□□□ -2
LTN1-206ENST00000486427 OR8B4Q96RC9 309 aa2.55□□□□□ -2
LTN1-206ENST00000486427 SORT1Q99523 831 aa2.55□□□□□ -2
LTN1-206ENST00000486427 PTBP2Q9UKA9 531 aaKnown RBP2.55□□□□□ -2
LTN1-206ENST00000486427 ISY1Q9ULR0 285 aaKnown RBP2.55□□□□□ -2
LTN1-206ENST00000486427 PSG8Q9UQ74 426 aa2.55□□□□□ -2
LTN1-206ENST00000486427 BRWD3Q6RI45 1802 aa2.54□□□□□ -2
LTN1-206ENST00000486427 YEATS2Q9ULM3 1422 aa2.54□□□□□ -2
LTN1-206ENST00000486427 CENPJQ9HC77 1338 aaPredicted RBP2.54□□□□□ -2
LTN1-206ENST00000486427 ZNF233A6NK53 670 aa2.54□□□□□ -2
LTN1-206ENST00000486427 ZNF207O43670 478 aaKnown RBP2.54□□□□□ -2
LTN1-206ENST00000486427 FCMRO60667 390 aa2.54□□□□□ -2
LTN1-206ENST00000486427 OR7A10O76100 309 aa2.54□□□□□ -2
LTN1-206ENST00000486427 IGHV2-5P01817 119 aa2.54□□□□□ -2
LTN1-206ENST00000486427 FGF1P05230 155 aa2.54□□□□□ -2
LTN1-206ENST00000486427 CAPN1P07384 714 aa2.54□□□□□ -2
LTN1-206ENST00000486427 GRIA1P42261 906 aa2.54□□□□□ -2
LTN1-206ENST00000486427 MMAAQ8IVH4 418 aaKnown RBP2.54□□□□□ -2
LTN1-206ENST00000486427 RSPH1Q8WYR4 309 aa2.54□□□□□ -2
LTN1-206ENST00000486427 COQ2Q96H96 371 aa2.54□□□□□ -2
LTN1-206ENST00000486427 RARRES2Q99969 163 aa2.54□□□□□ -2
LTN1-206ENST00000486427 ERP44Q9BS26 406 aa2.54□□□□□ -2
LTN1-206ENST00000486427 MRPL37Q9BZE1 423 aaKnown RBP2.54□□□□□ -2
LTN1-206ENST00000486427 MCCC2Q9HCC0 563 aa2.54□□□□□ -2
LTN1-206ENST00000486427 KIAA1257Q9ULG3 409 aa2.54□□□□□ -2
LTN1-206ENST00000486427 COL27A1Q8IZC6 1860 aaPredicted RBP2.54□□□□□ -2
LTN1-206ENST00000486427 IGHV3-74A0A0B4J1X5 117 aa2.53□□□□□ -2
LTN1-206ENST00000486427 RFX3P48380 749 aa2.53□□□□□ -2
LTN1-206ENST00000486427 CCT3P49368 545 aaKnown RBP2.53□□□□□ -2
LTN1-206ENST00000486427 TAF7Q15545 349 aaPredicted RBP2.53□□□□□ -2
LTN1-206ENST00000486427 UQCC3Q6UW78 93 aa2.53□□□□□ -2
LTN1-206ENST00000486427 KRTAP13-1Q8IUC0 172 aa2.53□□□□□ -2
LTN1-206ENST00000486427 PPA2Q9H2U2 334 aa2.53□□□□□ -2
LTN1-206ENST00000486427 MRPS7Q9Y2R9 242 aaKnown RBP2.53□□□□□ -2
LTN1-206ENST00000486427 TMEM14AQ9Y6G1 99 aa2.53□□□□□ -2
LTN1-206ENST00000486427 TRIOBPQ9H2D6 2365 aa2.53□□□□□ -2
LTN1-206ENST00000486427 TNS2Q63HR2 1409 aa2.52□□□□□ -2.01
LTN1-206ENST00000486427 TUBGCP6Q96RT7 1819 aa2.52□□□□□ -2.01
LTN1-206ENST00000486427 CDHR2Q9BYE9 1310 aa2.52□□□□□ -2.01
LTN1-206ENST00000486427 HIDE1A8MVS5 230 aa2.52□□□□□ -2.01
LTN1-206ENST00000486427 RRP8O43159 456 aaKnown RBP2.52□□□□□ -2.01
LTN1-206ENST00000486427 GABARAPO95166 117 aa2.52□□□□□ -2.01
LTN1-206ENST00000486427 LOXL1Q08397 574 aaPredicted RBP2.52□□□□□ -2.01
LTN1-206ENST00000486427 PHYHD1Q5SRE7 291 aa2.52□□□□□ -2.01
LTN1-206ENST00000486427 OR5D13Q8NGL4 314 aa2.52□□□□□ -2.01
LTN1-206ENST00000486427 SCFD1Q8WVM8 642 aa2.52□□□□□ -2.01
LTN1-206ENST00000486427 C10orf35Q96D05 121 aa2.52□□□□□ -2.01
LTN1-206ENST00000486427 ADAM28Q9UKQ2 775 aa2.52□□□□□ -2.01
LTN1-206ENST00000486427 TRAV26-1A0A087WT03 109 aa2.51□□□□□ -2.01
LTN1-206ENST00000486427 TMEM223A0PJW6 202 aa2.51□□□□□ -2.01
LTN1-206ENST00000486427 K7EM74 188 aa2.51□□□□□ -2.01
LTN1-206ENST00000486427 SGK1O00141 431 aa2.51□□□□□ -2.01
LTN1-206ENST00000486427 MAGEB3O15480 346 aa2.51□□□□□ -2.01
LTN1-206ENST00000486427 CCNKO75909 580 aa2.51□□□□□ -2.01
LTN1-206ENST00000486427 FABP3P05413 133 aa2.51□□□□□ -2.01
LTN1-206ENST00000486427 BCHEP06276 602 aa2.51□□□□□ -2.01
LTN1-206ENST00000486427 GNAO1P09471 354 aa2.51□□□□□ -2.01
LTN1-206ENST00000486427 POLR2MP0CAP2 368 aa2.51□□□□□ -2.01
LTN1-206ENST00000486427 AK4P27144 223 aaPredicted RBP2.51□□□□□ -2.01
LTN1-206ENST00000486427 NAMPTP43490 491 aa2.51□□□□□ -2.01
LTN1-206ENST00000486427 RORCP51449 518 aa2.51□□□□□ -2.01
LTN1-206ENST00000486427 GINS1Q14691 196 aa2.51□□□□□ -2.01
LTN1-206ENST00000486427 CEMP1Q6PRD7 247 aaPredicted RBP2.51□□□□□ -2.01
LTN1-206ENST00000486427 Q6ZPB1 254 aaPredicted RBP2.51□□□□□ -2.01
LTN1-206ENST00000486427 LGI3Q8N145 548 aa2.51□□□□□ -2.01
LTN1-206ENST00000486427 TMEM54Q969K7 222 aa2.51□□□□□ -2.01
LTN1-206ENST00000486427 PANX2Q96RD6 677 aa2.51□□□□□ -2.01
LTN1-206ENST00000486427 COPS8Q99627 209 aa2.51□□□□□ -2.01
LTN1-206ENST00000486427 ZSCAN5AQ9BUG6 496 aa2.51□□□□□ -2.01
LTN1-206ENST00000486427 NIPAL2Q9H841 368 aa2.51□□□□□ -2.01
LTN1-206ENST00000486427 HMG20AQ9NP66 347 aa2.51□□□□□ -2.01
LTN1-206ENST00000486427 SNX6Q9UNH7 406 aa2.51□□□□□ -2.01
LTN1-206ENST00000486427 MRPS18BQ9Y676 258 aaKnown RBP2.51□□□□□ -2.01
LTN1-206ENST00000486427 DDX49Q9Y6V7 483 aaKnown RBP2.51□□□□□ -2.01
LTN1-206ENST00000486427 GPR179Q6PRD1 2367 aa2.5□□□□□ -2.01
LTN1-206ENST00000486427 IGLV3-12A0A075B6K2 115 aa2.5□□□□□ -2.01
LTN1-206ENST00000486427 RAD51BO15315 384 aa2.5□□□□□ -2.01
LTN1-206ENST00000486427 SPAG6O75602 509 aa2.5□□□□□ -2.01
LTN1-206ENST00000486427 SLC25A14O95258 325 aaPredicted RBP2.5□□□□□ -2.01
LTN1-206ENST00000486427 UTS2O95399 124 aa2.5□□□□□ -2.01
LTN1-206ENST00000486427 CLDN9O95484 217 aa2.5□□□□□ -2.01
LTN1-206ENST00000486427 ATP5C1P36542 298 aaKnown RBP2.5□□□□□ -2.01
LTN1-206ENST00000486427 CDKN2BP42772 138 aa2.5□□□□□ -2.01
LTN1-206ENST00000486427 CSNK1A1P48729 337 aa2.5□□□□□ -2.01
LTN1-206ENST00000486427 ZNF92Q03936 586 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms