RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 TVP23BQ9NYZ1 205 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 ENPP5Q9UJA9 477 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 ICAM5Q9UMF0 924 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 VDAC3Q9Y277 283 aa8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 MAP1AP78559 2803 aaPredicted RBP8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 RAI1Q7Z5J4 1906 aaPredicted RBP8.35□□□□□ -1.07
TMEM39A-208ENST00000486159 A0A087WUJ7 227 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 EFCAB9A8MZ26 197 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 ALG1L2C9J202 215 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 GTPBP1O00178 669 aaKnown RBP8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 MSTNO14793 375 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 CASKO14936 926 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 SMAD7O15105 426 aaKnown RBP8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 SLC22A1O15245 554 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 ZNF264O43296 627 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 OIP5O43482 229 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 TLX2O43763 284 aaPredicted RBP8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 ENTPD6O75354 484 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 BCAS1O75363 584 aaPredicted RBP8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 INMTO95050 263 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 GABARAPO95166 117 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 FADS2O95864 444 aaKnown RBP8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 INHBBP09529 407 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 IFI30P13284 250 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 PAX7P23759 505 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 SHC1P29353 583 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 UGT2B10P36537 528 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 GP2P55259 537 aaKnown RBP8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 ROR2Q01974 943 aaKnown RBP8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 PLAURQ03405 335 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 PIGFQ07326 219 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 GUSBP1Q15486 140 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 BCL2A1Q16548 175 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 SYT14P1Q58G82 188 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 Q5PR19 223 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 ACSM5Q6NUN0 579 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 SMARCD3Q6STE5 483 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 GID4Q8IVV7 300 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 LNX2Q8N448 690 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 POC1BQ8TC44 478 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 SGCDQ92629 289 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 YIPF6Q96EC8 236 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 ARSGQ96EG1 525 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 PERPQ96FX8 193 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 C18orf12Q96KH6 178 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 Q96MF0 132 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 IL4I1Q96RQ9 567 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 TMEM43Q9BTV4 400 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 FUNDC2Q9BWH2 189 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 TMEM185BQ9H7F4 350 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 RNF122Q9H9V4 155 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 FGF20Q9NP95 211 aaPredicted RBP8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 NDRG3Q9UGV2 375 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 DIMT1Q9UNQ2 313 aaKnown RBP8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 ERGIC3Q9Y282 383 aa8.34□□□□□ -1.07
TMEM39A-208ENST00000486159 PRR14LQ5THK1 2151 aa8.34□□□□□ -1.08
TMEM39A-208ENST00000486159 A0A0J9YW62 118 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 H7C1Q1 480 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 EIF1AYO14602 144 aaKnown RBP8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 SURF4O15260 269 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 IDH3BO43837 385 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 EFNA2O43921 213 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 PRKYO43930 277 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 PTP4A3O75365 173 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 RAB36O95755 333 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 DBTP11182 482 aaKnown RBP8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 FOSL1P15407 271 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 CRYGSP22914 178 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 PSMB9P28065 219 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 SLC6A6P31641 620 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 MAP2K4P45985 399 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 GPR4P46093 362 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 EIF1AXP47813 144 aaKnown RBP8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 ZNF91Q05481 1191 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 SKP2Q13309 424 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 C1DQ13901 141 aaKnown RBP8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 TSC22D1Q15714 1073 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 ACKR1Q16570 336 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 TIMM50Q3ZCQ8 353 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 NXNL2Q5VZ03 156 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 C5orf46Q6UWT4 87 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 CLEC9AQ6UXN8 241 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 WDR88Q6ZMY6 472 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 CHMP1BQ7LBR1 199 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 P2RY8Q86VZ1 359 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 PRIMA1Q86XR5 153 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 MEIOBQ8N635 442 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 PROKR2Q8NFJ6 384 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 FANK1Q8TC84 345 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 PHOSPHO1Q8TCT1 267 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 LIPHQ8WWY8 451 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 SGTBQ96EQ0 304 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 SH3YL1Q96HL8 342 aaPredicted RBP8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 LRR1Q96L50 414 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 ZNF582Q96NG8 517 aaPredicted RBP8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 MED18Q9BUE0 208 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 MND1Q9BWT6 205 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 JAM3Q9BX67 310 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 OR52D1Q9H346 318 aa8.33□□□□□ -1.08
TMEM39A-208ENST00000486159 EGLN3Q9H6Z9 239 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms