RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 LIPHQ8WWY8 451 aa4.98□□□□□ -1.61
COPS3-208ENST00000486032 NSMAFQ92636 917 aa4.98□□□□□ -1.61
COPS3-208ENST00000486032 APH1AQ96BI3 265 aa4.98□□□□□ -1.61
COPS3-208ENST00000486032 STARD4Q96DR4 205 aa4.98□□□□□ -1.61
COPS3-208ENST00000486032 NRBF2Q96F24 287 aa4.98□□□□□ -1.61
COPS3-208ENST00000486032 Q96M85 177 aa4.98□□□□□ -1.61
COPS3-208ENST00000486032 DOCK7Q96N67 2140 aa4.98□□□□□ -1.61
COPS3-208ENST00000486032 ZNF570Q96NI8 536 aa4.98□□□□□ -1.61
COPS3-208ENST00000486032 FOXN4Q96NZ1 517 aa4.98□□□□□ -1.61
COPS3-208ENST00000486032 ALKBH3Q96Q83 286 aaPredicted RBP4.98□□□□□ -1.61
COPS3-208ENST00000486032 TSPAN32Q96QS1 320 aa4.98□□□□□ -1.61
COPS3-208ENST00000486032 RBM4BQ9BQ04 359 aaKnown RBP4.98□□□□□ -1.61
COPS3-208ENST00000486032 RBM4Q9BWF3 364 aaKnown RBP4.98□□□□□ -1.61
COPS3-208ENST00000486032 SF3B5Q9BWJ5 86 aaKnown RBP4.98□□□□□ -1.61
COPS3-208ENST00000486032 SFXN3Q9BWM7 321 aa4.98□□□□□ -1.61
COPS3-208ENST00000486032 OSBPL10Q9BXB5 764 aa4.98□□□□□ -1.61
COPS3-208ENST00000486032 DGCR6LQ9BY27 220 aa4.98□□□□□ -1.61
COPS3-208ENST00000486032 TXNIPQ9H3M7 391 aa4.98□□□□□ -1.61
COPS3-208ENST00000486032 FN3KQ9H479 309 aa4.98□□□□□ -1.61
COPS3-208ENST00000486032 RNPEPL1Q9HAU8 725 aa4.98□□□□□ -1.61
COPS3-208ENST00000486032 GLRX2Q9NS18 164 aa4.98□□□□□ -1.61
COPS3-208ENST00000486032 TVP23BQ9NYZ1 205 aa4.98□□□□□ -1.61
COPS3-208ENST00000486032 B3GAT1Q9P2W7 334 aa4.98□□□□□ -1.61
COPS3-208ENST00000486032 STX18Q9P2W9 335 aaKnown RBP4.98□□□□□ -1.61
COPS3-208ENST00000486032 ING1Q9UK53 422 aaPredicted RBP4.98□□□□□ -1.61
COPS3-208ENST00000486032 HECTD1Q9ULT8 2610 aa4.98□□□□□ -1.61
COPS3-208ENST00000486032 IGKV3D-15A0A087WSY6 115 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 CIB4A0PJX0 185 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 A1L4Q6 167 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 ARRDC5A6NEK1 342 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 ZNF724A8MTY0 619 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 FAM171A2A8MVW0 826 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 M0R129 80 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 XKRYO14609 159 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 IMPA2O14732 288 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 MGRN1O60291 552 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 SLC43A1O75387 559 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 TNFSF13O75888 250 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 SEC14L2O76054 403 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 SLC2A10O95528 541 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 SNAP29O95721 258 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 RENP00797 406 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 IGHG1P01857 330 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 TP53P04637 393 aaPredicted RBP4.97□□□□□ -1.61
COPS3-208ENST00000486032 CD14P08571 375 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 ACADSP16219 412 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 HIST1H1CP16403 213 aaKnown RBP4.97□□□□□ -1.61
COPS3-208ENST00000486032 CHRNB4P30926 498 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 POLR2IP36954 125 aaKnown RBP4.97□□□□□ -1.61
COPS3-208ENST00000486032 CSNK1A1P48729 337 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 DAP3P51398 398 aaKnown RBP4.97□□□□□ -1.61
COPS3-208ENST00000486032 ALDH3A2P51648 485 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 SLC16A1P53985 500 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 CRISP1P54107 249 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 RAD23AP54725 363 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 FOXG1P55316 489 aaPredicted RBP4.97□□□□□ -1.61
COPS3-208ENST00000486032 RPL27P61353 136 aaKnown RBP4.97□□□□□ -1.61
COPS3-208ENST00000486032 RPS4XP62701 263 aaKnown RBP4.97□□□□□ -1.61
COPS3-208ENST00000486032 RUNX1T1Q06455 604 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 FMODQ06828 376 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.97□□□□□ -1.61
COPS3-208ENST00000486032 COX10Q12887 443 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 KRR1Q13601 381 aaKnown RBP4.97□□□□□ -1.61
COPS3-208ENST00000486032 FHL1Q13642 323 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 GINS1Q14691 196 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 PDK3Q15120 406 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 POU4F3Q15319 338 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 PGGHGQ32M88 737 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 ANKDD1AQ495B1 522 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 PHYHD1Q5SRE7 291 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 TSPO2Q5TGU0 170 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 RPL13AP3Q6NVV1 102 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 FAHD1Q6P587 224 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 LEG1Q6P5S2 330 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 DPY19L2P2Q6ZN68 376 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.97□□□□□ -1.61
COPS3-208ENST00000486032 GPR137CQ8N3F9 429 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 CLDN22Q8N7P3 220 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 CYB561A3Q8NBI2 242 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 RELL2Q8NC24 303 aaPredicted RBP4.97□□□□□ -1.61
COPS3-208ENST00000486032 OR52E2Q8NGJ4 325 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 OR6K3Q8NGY3 331 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 OR4K13Q8NH42 304 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 CYGBQ8WWM9 190 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 ASB10Q8WXI3 467 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 HTRA1Q92743 480 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 HDAC2Q92769 488 aaKnown RBP4.97□□□□□ -1.61
COPS3-208ENST00000486032 ZNF566Q969W8 418 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 MISP3Q96FF7 219 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 PLEKHA8Q96JA3 519 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 ZFP3Q96NJ6 502 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 OR2M2Q96R28 347 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 TACO1Q9BSH4 297 aaKnown RBP4.97□□□□□ -1.61
COPS3-208ENST00000486032 RBM24Q9BX46 236 aaKnown RBP4.97□□□□□ -1.61
COPS3-208ENST00000486032 ULBP2Q9BZM5 246 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 GABARAPL1Q9H0R8 117 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 SLCO5A1Q9H2Y9 848 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 BCO1Q9HAY6 547 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 SLC7A10Q9NS82 523 aa4.97□□□□□ -1.61
COPS3-208ENST00000486032 PARPBPQ9NWS1 579 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms