RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 ACTR3BQ9P1U1 418 aa1.43□□□□□ -2.18
SCAF11-207ENST00000484275 HOOK1Q9UJC3 728 aaKnown RBP1.43□□□□□ -2.18
SCAF11-207ENST00000484275 RPH3ALQ9UNE2 315 aa1.43□□□□□ -2.18
SCAF11-207ENST00000484275 MRPS18BQ9Y676 258 aaKnown RBP1.43□□□□□ -2.18
SCAF11-207ENST00000484275 ATP8B3O60423 1300 aa1.42□□□□□ -2.18
SCAF11-207ENST00000484275 CENPJQ9HC77 1338 aaPredicted RBP1.42□□□□□ -2.18
SCAF11-207ENST00000484275 MED7O43513 233 aa1.42□□□□□ -2.18
SCAF11-207ENST00000484275 TOM1O60784 492 aa1.42□□□□□ -2.18
SCAF11-207ENST00000484275 EPB41P11171 864 aaKnown RBP1.42□□□□□ -2.18
SCAF11-207ENST00000484275 TCN1P20061 433 aaPredicted RBP1.42□□□□□ -2.18
SCAF11-207ENST00000484275 RORAP35398 523 aa1.42□□□□□ -2.18
SCAF11-207ENST00000484275 RPL13AP40429 203 aaKnown RBP1.42□□□□□ -2.18
SCAF11-207ENST00000484275 OPRK1P41145 380 aa1.42□□□□□ -2.18
SCAF11-207ENST00000484275 CDKN2BP42772 138 aa1.42□□□□□ -2.18
SCAF11-207ENST00000484275 NCBP1Q09161 790 aaKnown RBP1.42□□□□□ -2.18
SCAF11-207ENST00000484275 GANABQ14697 944 aaKnown RBP1.42□□□□□ -2.18
SCAF11-207ENST00000484275 TATDN3Q17R31 274 aa1.42□□□□□ -2.18
SCAF11-207ENST00000484275 TRIM40Q6P9F5 258 aa1.42□□□□□ -2.18
SCAF11-207ENST00000484275 CCDC50Q8IVM0 306 aa1.42□□□□□ -2.18
SCAF11-207ENST00000484275 PUSL1Q8N0Z8 303 aaKnown RBP1.42□□□□□ -2.18
SCAF11-207ENST00000484275 OR5D13Q8NGL4 314 aa1.42□□□□□ -2.18
SCAF11-207ENST00000484275 TRMT10AQ8TBZ6 339 aaKnown RBP1.42□□□□□ -2.18
SCAF11-207ENST00000484275 PYROXD1Q8WU10 500 aa1.42□□□□□ -2.18
SCAF11-207ENST00000484275 RARRES2Q99969 163 aa1.42□□□□□ -2.18
SCAF11-207ENST00000484275 SULT4A1Q9BR01 284 aa1.42□□□□□ -2.18
SCAF11-207ENST00000484275 OSBPL10Q9BXB5 764 aa1.42□□□□□ -2.18
SCAF11-207ENST00000484275 MRPL37Q9BZE1 423 aaKnown RBP1.42□□□□□ -2.18
SCAF11-207ENST00000484275 SYNDIG1Q9H7V2 258 aa1.42□□□□□ -2.18
SCAF11-207ENST00000484275 MCCC2Q9HCC0 563 aa1.42□□□□□ -2.18
SCAF11-207ENST00000484275 ADAMTS13Q76LX8 1427 aa1.41□□□□□ -2.18
SCAF11-207ENST00000484275 IGKV2-24A0A0C4DH68 120 aa1.41□□□□□ -2.18
SCAF11-207ENST00000484275 RGSL1A5PLK6 1076 aa1.41□□□□□ -2.18
SCAF11-207ENST00000484275 METTL21EPA6NDL7 271 aa1.41□□□□□ -2.18
SCAF11-207ENST00000484275 CCDC182A6NF36 153 aa1.41□□□□□ -2.18
SCAF11-207ENST00000484275 POLR2DO15514 142 aaKnown RBP1.41□□□□□ -2.18
SCAF11-207ENST00000484275 GCM2O75603 506 aaPredicted RBP1.41□□□□□ -2.18
SCAF11-207ENST00000484275 ATP6V1C1P21283 382 aa1.41□□□□□ -2.18
SCAF11-207ENST00000484275 OPRD1P41143 372 aa1.41□□□□□ -2.18
SCAF11-207ENST00000484275 CDK16Q00536 496 aa1.41□□□□□ -2.18
SCAF11-207ENST00000484275 INAQ16352 499 aa1.41□□□□□ -2.18
SCAF11-207ENST00000484275 SNRNP35Q16560 246 aaKnown RBP1.41□□□□□ -2.18
SCAF11-207ENST00000484275 SMUG1Q53HV7 270 aa1.41□□□□□ -2.18
SCAF11-207ENST00000484275 TMEM205Q6UW68 189 aa1.41□□□□□ -2.18
SCAF11-207ENST00000484275 LINC00336Q6ZUF6 198 aa1.41□□□□□ -2.18
SCAF11-207ENST00000484275 ARL10Q8N8L6 244 aa1.41□□□□□ -2.18
SCAF11-207ENST00000484275 ANKFN1Q8N957 763 aa1.41□□□□□ -2.18
SCAF11-207ENST00000484275 ZNF557Q8N988 423 aaPredicted RBP1.41□□□□□ -2.18
SCAF11-207ENST00000484275 CIRBP-AS1Q8TBR5 109 aa1.41□□□□□ -2.18
SCAF11-207ENST00000484275 CXorf40BQ96DE9 158 aa1.41□□□□□ -2.18
SCAF11-207ENST00000484275 RNF157Q96PX1 679 aa1.41□□□□□ -2.18
SCAF11-207ENST00000484275 SLC38A2Q96QD8 506 aa1.41□□□□□ -2.18
SCAF11-207ENST00000484275 ZSCAN5AQ9BUG6 496 aa1.41□□□□□ -2.18
SCAF11-207ENST00000484275 ZNF717Q9BY31 904 aaPredicted RBP1.41□□□□□ -2.18
SCAF11-207ENST00000484275 UBE2ZQ9H832 354 aaPredicted RBP1.41□□□□□ -2.18
SCAF11-207ENST00000484275 MRPL47Q9HD33 250 aaKnown RBP1.41□□□□□ -2.18
SCAF11-207ENST00000484275 ISYNA1Q9NPH2 558 aa1.41□□□□□ -2.18
SCAF11-207ENST00000484275 UFSP2Q9NUQ7 469 aa1.41□□□□□ -2.18
SCAF11-207ENST00000484275 PIPOXQ9P0Z9 390 aa1.41□□□□□ -2.18
SCAF11-207ENST00000484275 RPAP1Q9BWH6 1393 aaPredicted RBP1.4□□□□□ -2.19
SCAF11-207ENST00000484275 RHOBTB1O94844 696 aa1.4□□□□□ -2.19
SCAF11-207ENST00000484275 UTS2O95399 124 aa1.4□□□□□ -2.19
SCAF11-207ENST00000484275 SLC2A5P22732 501 aa1.4□□□□□ -2.19
SCAF11-207ENST00000484275 AK4P27144 223 aaPredicted RBP1.4□□□□□ -2.19
SCAF11-207ENST00000484275 CCR1P32246 355 aa1.4□□□□□ -2.19
SCAF11-207ENST00000484275 CDKN1BP46527 198 aa1.4□□□□□ -2.19
SCAF11-207ENST00000484275 PSMD8P48556 350 aa1.4□□□□□ -2.19
SCAF11-207ENST00000484275 PPT1P50897 306 aa1.4□□□□□ -2.19
SCAF11-207ENST00000484275 RORCP51449 518 aa1.4□□□□□ -2.19
SCAF11-207ENST00000484275 IL15RAQ13261 267 aa1.4□□□□□ -2.19
SCAF11-207ENST00000484275 MAB21L1Q13394 359 aa1.4□□□□□ -2.19
SCAF11-207ENST00000484275 DPYSL2Q16555 572 aa1.4□□□□□ -2.19
SCAF11-207ENST00000484275 TTC23Q5W5X9 447 aa1.4□□□□□ -2.19
SCAF11-207ENST00000484275 CNSTQ6PJW8 725 aa1.4□□□□□ -2.19
SCAF11-207ENST00000484275 LRRC52Q8N7C0 313 aa1.4□□□□□ -2.19
SCAF11-207ENST00000484275 OR8U1Q8NH10 309 aa1.4□□□□□ -2.19
SCAF11-207ENST00000484275 OR4S2Q8NH73 311 aa1.4□□□□□ -2.19
SCAF11-207ENST00000484275 ABHD3Q8WU67 409 aa1.4□□□□□ -2.19
SCAF11-207ENST00000484275 ZNF681Q96N22 645 aa1.4□□□□□ -2.19
SCAF11-207ENST00000484275 CCT7Q99832 543 aa1.4□□□□□ -2.19
SCAF11-207ENST00000484275 LHX5Q9H2C1 402 aa1.4□□□□□ -2.19
SCAF11-207ENST00000484275 SCN4AP35499 1836 aa1.4□□□□□ -2.19
SCAF11-207ENST00000484275 GPRASP1Q5JY77 1395 aa1.39□□□□□ -2.19
SCAF11-207ENST00000484275 ARPC4-TTLL3A0A0A6YYG9 625 aa1.39□□□□□ -2.19
SCAF11-207ENST00000484275 IGHV2-5P01817 119 aa1.39□□□□□ -2.19
SCAF11-207ENST00000484275 APCSP02743 223 aa1.39□□□□□ -2.19
SCAF11-207ENST00000484275 CAPN1P07384 714 aa1.39□□□□□ -2.19
SCAF11-207ENST00000484275 C1GALT1C1LP0DN25 315 aa1.39□□□□□ -2.19
SCAF11-207ENST00000484275 CD99P14209 185 aa1.39□□□□□ -2.19
SCAF11-207ENST00000484275 HRH1P35367 487 aa1.39□□□□□ -2.19
SCAF11-207ENST00000484275 MDH1P40925 334 aaKnown RBP1.39□□□□□ -2.19
SCAF11-207ENST00000484275 DUSP3P51452 185 aaPredicted RBP1.39□□□□□ -2.19
SCAF11-207ENST00000484275 MESDQ14696 234 aa1.39□□□□□ -2.19
SCAF11-207ENST00000484275 RGNQ15493 299 aa1.39□□□□□ -2.19
SCAF11-207ENST00000484275 ZFP1Q6P2D0 407 aa1.39□□□□□ -2.19
SCAF11-207ENST00000484275 UNQ9165/PRO28630Q6UXU0 137 aa1.39□□□□□ -2.19
SCAF11-207ENST00000484275 NUDCD3Q8IVD9 361 aa1.39□□□□□ -2.19
SCAF11-207ENST00000484275 ZNF683Q8IZ20 524 aa1.39□□□□□ -2.19
SCAF11-207ENST00000484275 MFSD9Q8NBP5 474 aa1.39□□□□□ -2.19
SCAF11-207ENST00000484275 OR1P1Q8NH06 330 aa1.39□□□□□ -2.19
SCAF11-207ENST00000484275 LINC01560Q8TB33 94 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms