RNA–Protein interactions for RNA: ENST00000483216.1

USP40-213, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 4

Gene USP40, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-213ENST00000483216 ACOXLQ9NUZ1 547 aa4.5□□□□□ -1.69
USP40-213ENST00000483216 CCDC167Q9P0B6 97 aa4.5□□□□□ -1.69
USP40-213ENST00000483216 EMCNQ9ULC0 261 aa4.5□□□□□ -1.69
USP40-213ENST00000483216 KCNK6Q9Y257 313 aa4.5□□□□□ -1.69
USP40-213ENST00000483216 NOSIPQ9Y314 301 aaKnown RBP4.5□□□□□ -1.69
USP40-213ENST00000483216 ZNF175Q9Y473 711 aa4.5□□□□□ -1.69
USP40-213ENST00000483216 FKBP7Q9Y680 259 aa4.5□□□□□ -1.69
USP40-213ENST00000483216 BRCA1P38398 1863 aaKnown RBP4.49□□□□□ -1.69
USP40-213ENST00000483216 A0A1B0GVI7 797 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 A8MU10 97 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 BTN3A3O00478 584 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 SDHDO14521 159 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 EEDO75530 441 aaKnown RBP4.49□□□□□ -1.69
USP40-213ENST00000483216 OR2B3O76000 313 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 KBTBD11O94819 623 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 AP2A1O95782 977 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 DHFRP00374 187 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 CST1P01037 141 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 C1QAP02745 245 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 ALPPP05187 535 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 ASNSP08243 561 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 HLA-EP13747 358 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 CD36P16671 472 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 PRKACAP17612 351 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 RPS12P25398 132 aaKnown RBP4.49□□□□□ -1.69
USP40-213ENST00000483216 PSMA1P25786 263 aaKnown RBP4.49□□□□□ -1.69
USP40-213ENST00000483216 EPHX2P34913 555 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 HTR2BP41595 481 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 HCAR3P49019 387 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 ERFP50548 548 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 TNFSF10P50591 281 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 IL5RAQ01344 420 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 FLI1Q01543 452 aaPredicted RBP4.49□□□□□ -1.69
USP40-213ENST00000483216 EMX2Q04743 252 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 ASAH1Q13510 395 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 CAPRIN1Q14444 709 aaKnown RBP4.49□□□□□ -1.69
USP40-213ENST00000483216 TSNQ15631 228 aaKnown RBP4.49□□□□□ -1.69
USP40-213ENST00000483216 GLYATQ6IB77 296 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 SCARA5Q6ZMJ2 495 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 TMPRSS11AQ6ZMR5 421 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 USP50Q70EL3 339 aaPredicted RBP4.49□□□□□ -1.69
USP40-213ENST00000483216 ZNF584Q8IVC4 421 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 CNTN4Q8IWV2 1026 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 CCDC36Q8IYA8 594 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 LRRC17Q8N6Y2 441 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 COLGALT1Q8NBJ5 622 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 DENND6BQ8NEG7 585 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 OR1K1Q8NGR3 316 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 RHEBL1Q8TAI7 183 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 ZFP90Q8TF47 636 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 ASB13Q8WXK3 278 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 YIPF6Q96EC8 236 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 L3HYPDHQ96EM0 354 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 COL21A1Q96P44 957 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 TCEAL7Q9BRU2 100 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 MRPL9Q9BYD2 267 aaKnown RBP4.49□□□□□ -1.69
USP40-213ENST00000483216 C20orf27Q9GZN8 174 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 SLIRPQ9GZT3 109 aaKnown RBP4.49□□□□□ -1.69
USP40-213ENST00000483216 PIGUQ9H490 435 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 CAB39LQ9H9S4 337 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 ZNF275Q9NSD4 429 aaPredicted RBP4.49□□□□□ -1.69
USP40-213ENST00000483216 MED9Q9NWA0 146 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 PAQR5Q9NXK6 330 aaPredicted RBP4.49□□□□□ -1.69
USP40-213ENST00000483216 GLTPQ9NZD2 209 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 SPG21Q9NZD8 308 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 AKAP7Q9P0M2 348 aaPredicted RBP4.49□□□□□ -1.69
USP40-213ENST00000483216 RAB23Q9ULC3 237 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 BAIAP2Q9UQB8 552 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 RNF6Q9Y252 685 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 BTRCQ9Y297 605 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 RBMX2Q9Y388 322 aaKnown RBP4.49□□□□□ -1.69
USP40-213ENST00000483216 MAB21L2Q9Y586 359 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 SBF1O95248 1867 aa4.49□□□□□ -1.69
USP40-213ENST00000483216 FER1L6Q2WGJ9 1857 aa4.48□□□□□ -1.69
USP40-213ENST00000483216 METTL15A6NJ78 407 aa4.48□□□□□ -1.69
USP40-213ENST00000483216 RNF212BA8MTL3 300 aa4.48□□□□□ -1.69
USP40-213ENST00000483216 ZNF780AO75290 641 aaPredicted RBP4.48□□□□□ -1.69
USP40-213ENST00000483216 SNAP29O95721 258 aa4.48□□□□□ -1.69
USP40-213ENST00000483216 LGI1O95970 557 aa4.48□□□□□ -1.69
USP40-213ENST00000483216 IL6P05231 212 aa4.48□□□□□ -1.69
USP40-213ENST00000483216 S100A9P06702 114 aaKnown RBP4.48□□□□□ -1.69
USP40-213ENST00000483216 SERPINF2P08697 491 aa4.48□□□□□ -1.69
USP40-213ENST00000483216 CT45A8P0DMV1 189 aa4.48□□□□□ -1.69
USP40-213ENST00000483216 CT45A9P0DMV2 189 aa4.48□□□□□ -1.69
USP40-213ENST00000483216 PSKH1P11801 424 aa4.48□□□□□ -1.69
USP40-213ENST00000483216 CYP3A5P20815 502 aa4.48□□□□□ -1.69
USP40-213ENST00000483216 PPIBP23284 216 aaKnown RBP4.48□□□□□ -1.69
USP40-213ENST00000483216 WARSP23381 471 aaKnown RBP4.48□□□□□ -1.69
USP40-213ENST00000483216 IGFBP5P24593 272 aa4.48□□□□□ -1.69
USP40-213ENST00000483216 MYL9P24844 172 aa4.48□□□□□ -1.69
USP40-213ENST00000483216 GEMP55040 296 aa4.48□□□□□ -1.69
USP40-213ENST00000483216 SSTP61278 116 aa4.48□□□□□ -1.69
USP40-213ENST00000483216 B2MP61769 119 aa4.48□□□□□ -1.69
USP40-213ENST00000483216 HERVK_113P63132 956 aa4.48□□□□□ -1.69
USP40-213ENST00000483216 SLC35A2P78381 396 aa4.48□□□□□ -1.69
USP40-213ENST00000483216 IFITM2Q01629 132 aa4.48□□□□□ -1.69
USP40-213ENST00000483216 HSF2Q03933 536 aa4.48□□□□□ -1.69
USP40-213ENST00000483216 EMX1Q04741 257 aaPredicted RBP4.48□□□□□ -1.69
USP40-213ENST00000483216 LIPEQ05469 1076 aa4.48□□□□□ -1.69
USP40-213ENST00000483216 LCP2Q13094 533 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms