RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 RRM2BQ7LG56 351 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 NRMQ8IXM6 262 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 CDK20Q8IZL9 346 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 RNF113BQ8IZP6 322 aaKnown RBP12.05□□□□□ -0.48
VARS-225ENST00000482996 NOXO1Q8NFA2 376 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 NUP37Q8NFH4 326 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 MOSPD2Q8NHP6 518 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 ASB10Q8WXI3 467 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 ACOT11Q8WXI4 607 aaPredicted RBP12.05□□□□□ -0.48
VARS-225ENST00000482996 RHNO1Q9BSD3 238 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 RHCGQ9UBD6 479 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 EGFL7Q9UHF1 273 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 TAGLN3Q9UI15 199 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 FBXO9Q9UK97 447 aaPredicted RBP12.05□□□□□ -0.48
VARS-225ENST00000482996 SAMD4AQ9UPU9 718 aaKnown RBP12.05□□□□□ -0.48
VARS-225ENST00000482996 HIF3AQ9Y2N7 669 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 FAM32AQ9Y421 112 aaKnown RBP12.05□□□□□ -0.48
VARS-225ENST00000482996 ENPP4Q9Y6X5 453 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 B9A039 149 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 RNF223E7ERA6 249 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 FFAR1O14842 300 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 OR4A8P0C604 315 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 TSPAN19P0C672 248 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 OR8G3PP0DMU2 310 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 ACADSP16219 412 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 GIPRP48546 466 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 PTDSS1P48651 473 aaKnown RBP12.04□□□□□ -0.48
VARS-225ENST00000482996 RAB1AP62820 205 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 PRKCDQ05655 676 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 LAPTM4AQ15012 233 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 SWI5Q1ZZU3 235 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 ANKDD1AQ495B1 522 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 SAMD4BQ5PRF9 694 aaKnown RBP12.04□□□□□ -0.48
VARS-225ENST00000482996 CLEC2AQ6UVW9 174 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 DPPA2Q7Z7J5 298 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 MYPOPQ86VE0 399 aaPredicted RBP12.04□□□□□ -0.48
VARS-225ENST00000482996 SLC22A24Q8N4F4 322 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 SYT14Q8NB59 555 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 ZNF347Q96SE7 839 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 REG4Q9BYZ8 158 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 NDEL1Q9GZM8 345 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 TXNIPQ9H3M7 391 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 ANKRD19PQ9H560 264 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 ZNF442Q9H7R0 627 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 MAN2C1Q9NTJ4 1040 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 TMEM38BQ9NVV0 291 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 NDE1Q9NXR1 346 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 SPEF1Q9Y4P9 236 aa12.04□□□□□ -0.48
VARS-225ENST00000482996 EFCAB9A8MZ26 197 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 TRMUO75648 421 aaKnown RBP12.03□□□□□ -0.48
VARS-225ENST00000482996 NPR2P20594 1047 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 MAKP20794 623 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 SLC9A3P48764 834 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 MNAT1P51948 309 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 EFNA4P52798 201 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 MXRA7P84157 204 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 HGFACQ04756 655 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 RUNX1T1Q06455 604 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 TOP3AQ13472 1001 aaPredicted RBP12.03□□□□□ -0.48
VARS-225ENST00000482996 DAG1Q14118 895 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 EFNB3Q15768 340 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 ADIPOQQ15848 244 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 HIST3H3Q16695 136 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 MST1LQ2TV78 715 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 NRN1LQ496H8 165 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 ARMC4Q5T2S8 1044 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 TMEM53Q6P2H8 277 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 DNM1P46Q6ZS02 220 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 MBOAT2Q6ZWT7 520 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 OAFQ86UD1 273 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 SKA3Q8IX90 412 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 PGAM4Q8N0Y7 254 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 RNF148Q8N7C7 305 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 MCHR2Q969V1 340 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 SEPHS2Q99611 448 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 MRPL13Q9BYD1 178 aaKnown RBP12.03□□□□□ -0.48
VARS-225ENST00000482996 NMNAT1Q9HAN9 279 aaPredicted RBP12.03□□□□□ -0.48
VARS-225ENST00000482996 NOX3Q9HBY0 568 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 DCAF13Q9NV06 445 aaKnown RBP12.03□□□□□ -0.48
VARS-225ENST00000482996 MAGEL2Q9UJ55 1249 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 TMEM5Q9Y2B1 443 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 FKBP7Q9Y680 259 aa12.03□□□□□ -0.48
VARS-225ENST00000482996 ARFGEF3Q5TH69 2177 aa12.02□□□□□ -0.48
VARS-225ENST00000482996 A0A087WUU8 490 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 MGRN1O60291 552 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 PRSS23O95084 383 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 H1F0P07305 194 aaKnown RBP12.02□□□□□ -0.49
VARS-225ENST00000482996 CSF3P09919 207 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 HSD17B1P14061 328 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 ZNF14P17017 642 aaPredicted RBP12.02□□□□□ -0.49
VARS-225ENST00000482996 RHCEP18577 417 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 TCN1P20061 433 aaPredicted RBP12.02□□□□□ -0.49
VARS-225ENST00000482996 THBS4P35443 961 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 RASSF2P50749 326 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 CTXN1P60606 82 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 LSM11P83369 360 aaKnown RBP eCLIP12.02□□□□□ -0.49
VARS-225ENST00000482996 MYBPC1Q00872 1141 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 GALK2Q01415 458 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 CD47Q08722 323 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 SNTB2Q13425 540 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms