RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 ASB10Q8WXI3 467 aa9.04□□□□□ -0.96
CPSF4-212ENST00000482251 SLC25A44Q96H78 314 aaPredicted RBP9.04□□□□□ -0.96
CPSF4-212ENST00000482251 ZNF75AQ96N20 296 aa9.04□□□□□ -0.96
CPSF4-212ENST00000482251 FOXN4Q96NZ1 517 aa9.04□□□□□ -0.96
CPSF4-212ENST00000482251 MRPL37Q9BZE1 423 aaKnown RBP9.04□□□□□ -0.96
CPSF4-212ENST00000482251 BPESC1Q9GZL8 116 aa9.04□□□□□ -0.96
CPSF4-212ENST00000482251 CCDC134Q9H6E4 229 aa9.04□□□□□ -0.96
CPSF4-212ENST00000482251 CHODLQ9H9P2 273 aa9.04□□□□□ -0.96
CPSF4-212ENST00000482251 MRGBPQ9NV56 204 aa9.04□□□□□ -0.96
CPSF4-212ENST00000482251 TMEM38BQ9NVV0 291 aa9.04□□□□□ -0.96
CPSF4-212ENST00000482251 CUBNO60494 3623 aa9.04□□□□□ -0.96
CPSF4-212ENST00000482251 RTTNQ86VV8 2226 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 TMEM129A0AVI4 362 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 LYNX1G3V0Z9 82 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 NME4O00746 187 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 DHHO43323 396 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 SLC2A10O95528 541 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 NPPAP01160 153 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 ADRA2AP08913 450 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 FAM157BP0CG42 384 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 LYNX1P0DP58 116 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 COX4I1P13073 169 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 APEHP13798 732 aaKnown RBP9.03□□□□□ -0.96
CPSF4-212ENST00000482251 DAOP14920 347 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 TCN1P20061 433 aaPredicted RBP9.03□□□□□ -0.96
CPSF4-212ENST00000482251 NR4A1P22736 598 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 MDH1P40925 334 aaKnown RBP9.03□□□□□ -0.96
CPSF4-212ENST00000482251 RBM34P42696 430 aaKnown RBP9.03□□□□□ -0.96
CPSF4-212ENST00000482251 ALDH3B1P43353 468 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 NR4A2P43354 598 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 NUDT2P50583 147 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 SLC7A2P52569 658 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 LIPEQ05469 1076 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 MAD2L1BPQ15013 274 aaPredicted RBP9.03□□□□□ -0.96
CPSF4-212ENST00000482251 ALKBH6Q3KRA9 238 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 IL17RELQ6ZVW7 336 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 LRP11Q86VZ4 500 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 TREML1Q86YW5 311 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 LRRC18Q8N456 261 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 PAQR4Q8N4S7 273 aaPredicted RBP9.03□□□□□ -0.96
CPSF4-212ENST00000482251 CLDN22Q8N7P3 220 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 RBM15BQ8NDT2 890 aaKnown RBP9.03□□□□□ -0.96
CPSF4-212ENST00000482251 MCHR2Q969V1 340 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 PRRC1Q96M27 445 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 FAM107BQ9H098 131 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 RAB1BQ9H0U4 201 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 RNF121Q9H920 327 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 INIPQ9NRY2 104 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 MYEF2Q9P2K5 600 aaKnown RBP9.03□□□□□ -0.96
CPSF4-212ENST00000482251 A4GNTQ9UNA3 340 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 MED31Q9Y3C7 131 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 CMAHPQ9Y471 501 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 SNX13Q9Y5W8 968 aa9.03□□□□□ -0.96
CPSF4-212ENST00000482251 TRAV27A0A087WT01 109 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 A0A1W2PPW3 197 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 LRP5LA4QPB2 252 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 VWC2LB2RUY7 222 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 M0R233 179 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 CXCR6O00574 342 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 GSTA4O15217 222 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 TRMUO75648 421 aaKnown RBP9.02□□□□□ -0.97
CPSF4-212ENST00000482251 FARS2O95363 451 aaKnown RBP9.02□□□□□ -0.97
CPSF4-212ENST00000482251 ERCC1P07992 297 aaPredicted RBP9.02□□□□□ -0.97
CPSF4-212ENST00000482251 IGFBP1P08833 259 aaPredicted RBP9.02□□□□□ -0.97
CPSF4-212ENST00000482251 OR8G3PP0DMU2 310 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 IFI30P13284 250 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 ZNF35P13682 527 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 NCK1P16333 377 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 CDAP32320 146 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 LSP1P33241 339 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 DAP3P51398 398 aaKnown RBP9.02□□□□□ -0.97
CPSF4-212ENST00000482251 ERVS71-1P61550 626 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 CD47Q08722 323 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 LAPTM4AQ15012 233 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 CHRFAM7AQ494W8 412 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 SLC16A14Q7RTX9 510 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 PIWIL3Q7Z3Z3 882 aaKnown RBP9.02□□□□□ -0.97
CPSF4-212ENST00000482251 ARPINQ7Z6K5 226 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 SLC15A3Q8IY34 581 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 ARIH2OSQ8N7S6 290 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 ICA1LQ8NDH6 482 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 SLC30A7Q8NEW0 376 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 IL17RDQ8NFM7 739 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 RP9Q8TA86 221 aaKnown RBP9.02□□□□□ -0.97
CPSF4-212ENST00000482251 NSMAFQ92636 917 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 HDAC2Q92769 488 aaKnown RBP9.02□□□□□ -0.97
CPSF4-212ENST00000482251 MRPL24Q96A35 216 aaKnown RBP9.02□□□□□ -0.97
CPSF4-212ENST00000482251 HSH2DQ96JZ2 352 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 KCNK17Q96T54 332 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 DOK1Q99704 481 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 SOX7Q9BT81 388 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 POLR2J2Q9GZM3 115 aaKnown RBP9.02□□□□□ -0.97
CPSF4-212ENST00000482251 POLR2J3Q9H1A7 115 aaKnown RBP9.02□□□□□ -0.97
CPSF4-212ENST00000482251 MED4Q9NPJ6 270 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 SPEF1Q9Y4P9 236 aa9.02□□□□□ -0.97
CPSF4-212ENST00000482251 YLPM1P49750 1951 aaKnown RBP9.01□□□□□ -0.97
CPSF4-212ENST00000482251 IGKV1D-43A0A0B4J1Z2 117 aa9.01□□□□□ -0.97
CPSF4-212ENST00000482251 LOC390937A0A1W2PQ73 354 aa9.01□□□□□ -0.97
CPSF4-212ENST00000482251 VSTM5A8MXK1 200 aa9.01□□□□□ -0.97
CPSF4-212ENST00000482251 H7C1C5 153 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms