RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 COPS3Q9UNS2 423 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 KLF13Q9Y2Y9 288 aaPredicted RBP9.86□□□□□ -0.83
VTI1A-204ENST00000480057 PEX16Q9Y5Y5 336 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 PMF1-BGLAPU3KQ54 211 aa9.86□□□□□ -0.83
VTI1A-204ENST00000480057 FRYLO94915 3013 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 EML6Q6ZMW3 1958 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 A0A1W2PNR3 127 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 OR5H15A6NDH6 313 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 CLDN25C9JDP6 229 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 G3V3Y1 287 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 GABRPO00591 440 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 TLX3O43711 291 aaPredicted RBP9.85□□□□□ -0.83
VTI1A-204ENST00000480057 NME2P1O60361 137 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 WDPCPO95876 746 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 IGHG1P01857 330 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 KRT8P05787 483 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 HPNP05981 417 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 CTLA4P16410 223 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 ZNF43P17038 809 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 NME2P22392 152 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 SFTPDP35247 375 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 TGFBR1P36897 503 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 BIDP55957 195 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 RAC3P60763 192 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 FOXK1P85037 733 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 CAMK2BQ13554 666 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 ZNF846Q147U1 533 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 CDK5R1Q15078 307 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 PCK2Q16822 640 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 C22orf42Q6IC83 251 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 SLC25A25Q6KCM7 469 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 SLC18B1Q6NT16 456 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 ASCL5Q7RTU5 278 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 MDS2Q8NDY4 140 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 FAM83FQ8NEG4 500 aaPredicted RBP9.85□□□□□ -0.83
VTI1A-204ENST00000480057 NOXO1Q8NFA2 376 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 OR6N2Q8NGY6 317 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 OR14L1PQ8NHC6 308 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 OTOSQ8NHW6 89 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 SLC25A46Q96AG3 418 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 SMIM19Q96E16 107 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 DNAJA3Q96EY1 480 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 TRMT61AQ96FX7 289 aaKnown RBP9.85□□□□□ -0.83
VTI1A-204ENST00000480057 SLC25A44Q96H78 314 aaPredicted RBP9.85□□□□□ -0.83
VTI1A-204ENST00000480057 PGLYRP3Q96LB9 341 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 RBP7Q96R05 134 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 TM9SF2Q99805 663 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 TTYH2Q9BSA4 534 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 TMEM185BQ9H7F4 350 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 AKIP1Q9NQ31 210 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 DLL3Q9NYJ7 618 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 KCNG2Q9UJ96 466 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 LAMP5Q9UJQ1 280 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 DOCK10Q96BY6 2186 aa9.85□□□□□ -0.83
VTI1A-204ENST00000480057 IQCMA0A1B0GVH7 501 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 ZNF891A8MT65 544 aaPredicted RBP9.84□□□□□ -0.83
VTI1A-204ENST00000480057 FAM171A2A8MVW0 826 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 E9PI62 339 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 KLRC4-KLRK1H3BQV0 150 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 SC5DO75845 299 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 GATBO75879 557 aaKnown RBP9.84□□□□□ -0.83
VTI1A-204ENST00000480057 AQP8O94778 261 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 ABHD16AO95870 558 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 SP1P08047 785 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 CD46P15529 392 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 CFL1P23528 166 aaKnown RBP9.84□□□□□ -0.83
VTI1A-204ENST00000480057 GDF1P27539 372 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 RPS19P39019 145 aaKnown RBP9.84□□□□□ -0.83
VTI1A-204ENST00000480057 MTNR1BP49286 362 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 ENTPD1P49961 510 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 BMXP51813 675 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 GFRA1P56159 465 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 GPR85P60893 370 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 ROM1Q03395 351 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 RUNX1T1Q06455 604 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 C19orf57Q0VDD7 668 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 TGIF1Q15583 401 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 TP53I3Q53FA7 332 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 PDSS1Q5T2R2 415 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 SPINK14Q6IE38 97 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 FDX2Q6P4F2 183 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 ARL9Q6T311 187 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 MARCH9Q86YJ5 346 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 KDM8Q8N371 416 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 RFLNBQ8N5W9 214 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 ZFP41Q8N8Y5 198 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 SLC26A10Q8NG04 563 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 AP3S1Q92572 193 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 HAS2Q92819 552 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 TMEM203Q969S6 136 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 INTS12Q96CB8 462 aaKnown RBP9.84□□□□□ -0.83
VTI1A-204ENST00000480057 SFXN2Q96NB2 322 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 SIGLEC12Q96PQ1 595 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 TMED9Q9BVK6 235 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 RNF167Q9H6Y7 350 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 ZNF703Q9H7S9 590 aaPredicted RBP9.84□□□□□ -0.83
VTI1A-204ENST00000480057 GALNT8Q9NY28 637 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 GNG8Q9UK08 70 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 B3GNT3Q9Y2A9 372 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 SIRT4Q9Y6E7 314 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms