RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	GPR171	O14626	319 aa		13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	LYPD3	O95274	346 aa		13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	OPN1LW	P04000	364 aa		13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	YES1	P07947	543 aa		13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	RPS5	P46782	204 aa	Known RBP	13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	SLC9A3	P48764	834 aa		13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	PDK3	Q15120	406 aa		13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	OR7A5	Q15622	319 aa		13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	IQCC	Q4KMZ1	466 aa		13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	TMEM225	Q6GV28	225 aa		13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	H1FNT	Q75WM6	255 aa	Predicted RBP	13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	FCRLA	Q7L513	359 aa		13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	NKAIN4	Q8IVV8	208 aa		13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	ADPRHL1	Q8NDY3	354 aa		13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	FAM216A	Q8WUB2	273 aa		13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	TMEM255B	Q8WV15	326 aa		13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	SLC25A36	Q96CQ1	311 aa		13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	BPIFA2	Q96DR5	249 aa		13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	KTI12	Q96EK9	354 aa	Predicted RBP	13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	NRBF2	Q96F24	287 aa		13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	ARL5B	Q96KC2	179 aa		13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	PRSS27	Q9BQR3	290 aa		13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	SF3B5	Q9BWJ5	86 aa	Known RBP	13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	OSBPL10	Q9BXB5	764 aa		13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	OCEL1	Q9H607	264 aa		13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	DENND2D	Q9H6A0	471 aa	Predicted RBP	13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	RHCG	Q9UBD6	479 aa		13.58	□□□□□ -0.24
HDLBP-238	ENST00000479894	IGKV1D-42	A0A075B6H8	117 aa		13.57	□□□□□ -0.24
HDLBP-238	ENST00000479894	OR5H1	A6NKK0	313 aa		13.57	□□□□□ -0.24
HDLBP-238	ENST00000479894	LYZL6	O75951	148 aa		13.57	□□□□□ -0.24
HDLBP-238	ENST00000479894	LY6H	O94772	140 aa		13.57	□□□□□ -0.24
HDLBP-238	ENST00000479894	CCNB2	O95067	398 aa		13.57	□□□□□ -0.24
HDLBP-238	ENST00000479894	THY1	P04216	161 aa		13.57	□□□□□ -0.24
HDLBP-238	ENST00000479894	COX5A	P20674	150 aa		13.57	□□□□□ -0.24
HDLBP-238	ENST00000479894	PCMT1	P22061	227 aa		13.57	□□□□□ -0.24
HDLBP-238	ENST00000479894	EGR4	Q05215	589 aa		13.57	□□□□□ -0.24
HDLBP-238	ENST00000479894	PRKCD	Q05655	676 aa		13.57	□□□□□ -0.24
HDLBP-238	ENST00000479894	KLHL17	Q6TDP4	642 aa		13.57	□□□□□ -0.24
HDLBP-238	ENST00000479894	B3GLCT	Q6Y288	498 aa		13.57	□□□□□ -0.24
HDLBP-238	ENST00000479894	TSEN54	Q7Z6J9	526 aa	Known RBP	13.57	□□□□□ -0.24
HDLBP-238	ENST00000479894	OR52J3	Q8NH60	311 aa		13.57	□□□□□ -0.24
HDLBP-238	ENST00000479894	SLC7A13	Q8TCU3	470 aa		13.57	□□□□□ -0.24
HDLBP-238	ENST00000479894	LIPH	Q8WWY8	451 aa		13.57	□□□□□ -0.24
HDLBP-238	ENST00000479894	TAAR8	Q969N4	342 aa		13.57	□□□□□ -0.24
HDLBP-238	ENST00000479894	COQ10B	Q9H8M1	238 aa		13.57	□□□□□ -0.24
HDLBP-238	ENST00000479894	MAN2C1	Q9NTJ4	1040 aa		13.57	□□□□□ -0.24
HDLBP-238	ENST00000479894	MRPL39	Q9NYK5	338 aa	Known RBP	13.57	□□□□□ -0.24
HDLBP-238	ENST00000479894		A0A087WUU8	490 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	LOC102725191	A0A1B0GVB3	256 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	SH3PXD2B	A1X283	911 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	ZC3H12D	A2A288	527 aa	Known RBP	13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	ARRDC5	A6NEK1	342 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	AKAP8	O43823	692 aa	Known RBP	13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	OR10H3	O60404	316 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	FZD7	O75084	574 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	DIRAS1	O95057	198 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	CH25H	O95992	272 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	IFI30	P13284	250 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	GSTM3	P21266	225 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	CD40	P25942	277 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	APOBEC3A	P31941	199 aa	Predicted RBP	13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	OR3A2	P47893	321 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	SCGB2A2	Q13296	93 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	PMS2P3	Q13401	168 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	ATP6AP1	Q15904	470 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	ZNF74	Q16587	644 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	TMPRSS11F	Q6ZWK6	438 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	NRM	Q8IXM6	262 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	OR4K5	Q8NGD3	323 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	DNAJC9	Q8WXX5	260 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	HPS1	Q92902	700 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	CENPN	Q96H22	339 aa	Predicted RBP	13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	FOXN4	Q96NZ1	517 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	SOX7	Q9BT81	388 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	ZNF556	Q9HAH1	456 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	PARPBP	Q9NWS1	579 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	LYVE1	Q9Y5Y7	322 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	NOTCH1	P46531	2555 aa		13.56	□□□□□ -0.24
HDLBP-238	ENST00000479894	AQP7P3	A6NL99	342 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	ZNF724	A8MTY0	619 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	EFCAB9	A8MZ26	197 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	FTCDNL1	E5RQL4	147 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894		H0YHG0	523 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	KPNA4	O00629	521 aa	Predicted RBP	13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	CYTIP	O60759	359 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	OR7A10	O76100	309 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	BGLAP	P02818	100 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	SAG	P10523	405 aa	Predicted RBP	13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	IMPDH2	P12268	514 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	FUT1	P19526	365 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	SHC1	P29353	583 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	PRPS1	P60891	318 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	H3F3A	P84243	136 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	MICA	Q29983	383 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	RPL13AP3	Q6NVV1	102 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	UGT2A3	Q6UWM9	527 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	WDR88	Q6ZMY6	472 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	HDDC2	Q7Z4H3	204 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	NANOGNB	Q7Z5D8	188 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms