RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 HIPK1Q86Z02 1210 aa12.44□□□□□ -0.42
ATG4B-218ENST00000479554 CCDC36Q8IYA8 594 aa12.44□□□□□ -0.42
ATG4B-218ENST00000479554 C20orf196Q8IYI0 205 aa12.44□□□□□ -0.42
ATG4B-218ENST00000479554 PAPD5Q8NDF8 572 aaKnown RBP12.44□□□□□ -0.42
ATG4B-218ENST00000479554 NUP37Q8NFH4 326 aa12.44□□□□□ -0.42
ATG4B-218ENST00000479554 ZNF837Q96EG3 531 aaPredicted RBP12.44□□□□□ -0.42
ATG4B-218ENST00000479554 PKP2Q99959 881 aa12.44□□□□□ -0.42
ATG4B-218ENST00000479554 VRK1Q99986 396 aaPredicted RBP12.44□□□□□ -0.42
ATG4B-218ENST00000479554 EMC6Q9BV81 110 aa12.44□□□□□ -0.42
ATG4B-218ENST00000479554 B3GAT2Q9NPZ5 323 aa12.44□□□□□ -0.42
ATG4B-218ENST00000479554 MED29Q9NX70 200 aa12.44□□□□□ -0.42
ATG4B-218ENST00000479554 MRPL39Q9NYK5 338 aaKnown RBP12.44□□□□□ -0.42
ATG4B-218ENST00000479554 AURKCQ9UQB9 309 aa12.44□□□□□ -0.42
ATG4B-218ENST00000479554 ATRQ13535 2644 aa12.44□□□□□ -0.42
ATG4B-218ENST00000479554 ALPK2Q86TB3 2170 aa12.43□□□□□ -0.42
ATG4B-218ENST00000479554 SLC35F4A4IF30 521 aa12.43□□□□□ -0.42
ATG4B-218ENST00000479554 ZNF503-AS2A6NEH8 195 aa12.43□□□□□ -0.42
ATG4B-218ENST00000479554 CPSF4LA6NMK7 179 aaKnown RBP12.43□□□□□ -0.42
ATG4B-218ENST00000479554 LRRN3E7EW58 273 aa12.43□□□□□ -0.42
ATG4B-218ENST00000479554 CHP2O43745 196 aa12.43□□□□□ -0.42
ATG4B-218ENST00000479554 SERPINI2O75830 405 aa12.43□□□□□ -0.42
ATG4B-218ENST00000479554 MT-ATP6P00846 226 aa12.43□□□□□ -0.42
ATG4B-218ENST00000479554 USF1P22415 310 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-218ENST00000479554 AHCYP23526 432 aa12.43□□□□□ -0.42
ATG4B-218ENST00000479554 EFNB3Q15768 340 aa12.43□□□□□ -0.42
ATG4B-218ENST00000479554 CARTPTQ16568 116 aa12.43□□□□□ -0.42
ATG4B-218ENST00000479554 DUSP7Q16829 419 aa12.43□□□□□ -0.42
ATG4B-218ENST00000479554 CHRFAM7AQ494W8 412 aa12.43□□□□□ -0.42
ATG4B-218ENST00000479554 PHYHD1Q5SRE7 291 aa12.43□□□□□ -0.42
ATG4B-218ENST00000479554 OGFRL1Q5TC84 451 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-218ENST00000479554 SLC30A8Q8IWU4 369 aa12.43□□□□□ -0.42
ATG4B-218ENST00000479554 GPR32P1Q8NGA4 272 aa12.43□□□□□ -0.42
ATG4B-218ENST00000479554 OR6N1Q8NGY5 312 aa12.43□□□□□ -0.42
ATG4B-218ENST00000479554 VANGL1Q8TAA9 524 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-218ENST00000479554 LRR1Q96L50 414 aa12.43□□□□□ -0.42
ATG4B-218ENST00000479554 PIMREGQ9BSJ6 248 aa12.43□□□□□ -0.42
ATG4B-218ENST00000479554 ULBP2Q9BZM5 246 aa12.43□□□□□ -0.42
ATG4B-218ENST00000479554 PLK3Q9H4B4 646 aa12.43□□□□□ -0.42
ATG4B-218ENST00000479554 ZNF442Q9H7R0 627 aa12.43□□□□□ -0.42
ATG4B-218ENST00000479554 YY1AP1Q9H869 796 aa12.43□□□□□ -0.42
ATG4B-218ENST00000479554 FBXO9Q9UK97 447 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-218ENST00000479554 LRRC42Q9Y546 428 aa12.43□□□□□ -0.42
ATG4B-218ENST00000479554 ARFGEF3Q5TH69 2177 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 IGHV2OR16-5A0A0B4J2B6 119 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 ZNF726A6NNF4 738 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 VSTM5A8MXK1 200 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 M0QX08 132 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 NDUFS8O00217 210 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 PLPP3O14495 311 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 TIPRLO75663 272 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 IFNA2P01563 188 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 ADORA3P0DMS8 318 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 CD79AP11912 226 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 ZNF16P17020 682 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-218ENST00000479554 FASP25445 335 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 PCGF2P35227 344 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 PPOXP50336 477 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 HGFACQ04756 655 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 CAMK2DQ13557 499 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 GGTLC2Q14390 218 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 NPTX1Q15818 432 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 FAM98BQ52LJ0 330 aaKnown RBP12.42□□□□□ -0.42
ATG4B-218ENST00000479554 ENTPD8Q5MY95 495 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 INTS11Q5TA45 600 aaKnown RBP12.42□□□□□ -0.42
ATG4B-218ENST00000479554 ZNF813Q6ZN06 617 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 CXXC5Q7LFL8 322 aaKnown RBP12.42□□□□□ -0.42
ATG4B-218ENST00000479554 PXKQ7Z7A4 578 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 PATL1Q86TB9 770 aaKnown RBP12.42□□□□□ -0.42
ATG4B-218ENST00000479554 IL17RDQ8NFM7 739 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 OR6T1Q8NGN1 323 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 OR5J2Q8NH18 312 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 LRTOMTQ8WZ04 291 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 TXNDC15Q96J42 360 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 MYOZ1Q9NP98 299 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-218ENST00000479554 DCAF13Q9NV06 445 aaKnown RBP12.42□□□□□ -0.42
ATG4B-218ENST00000479554 POFUT2Q9Y2G5 429 aa12.42□□□□□ -0.42
ATG4B-218ENST00000479554 COL6A5A8TX70 2615 aa12.41□□□□□ -0.42
ATG4B-218ENST00000479554 C11orf98E9PRG8 122 aa12.41□□□□□ -0.42
ATG4B-218ENST00000479554 hCG_2039718K7EN88 272 aa12.41□□□□□ -0.42
ATG4B-218ENST00000479554 OR6A2O95222 327 aa12.41□□□□□ -0.42
ATG4B-218ENST00000479554 HLA-HP01893 362 aa12.41□□□□□ -0.42
ATG4B-218ENST00000479554 IGHV4-31P0DP07 118 aa12.41□□□□□ -0.42
ATG4B-218ENST00000479554 RAP2AP10114 183 aa12.41□□□□□ -0.42
ATG4B-218ENST00000479554 NPR2P20594 1047 aa12.41□□□□□ -0.42
ATG4B-218ENST00000479554 PEX2P28328 305 aa12.41□□□□□ -0.42
ATG4B-218ENST00000479554 THBS4P35443 961 aa12.41□□□□□ -0.42
ATG4B-218ENST00000479554 NR4A2P43354 598 aa12.41□□□□□ -0.42
ATG4B-218ENST00000479554 CSNK1A1P48729 337 aa12.41□□□□□ -0.42
ATG4B-218ENST00000479554 LSM11P83369 360 aaKnown RBP eCLIP12.41□□□□□ -0.42
ATG4B-218ENST00000479554 SNTB2Q13425 540 aaKnown RBP12.41□□□□□ -0.42
ATG4B-218ENST00000479554 GSG1Q2KHT4 349 aa12.41□□□□□ -0.42
ATG4B-218ENST00000479554 LPCAT4Q643R3 524 aa12.41□□□□□ -0.42
ATG4B-218ENST00000479554 CYB5R2Q6BCY4 276 aa12.41□□□□□ -0.42
ATG4B-218ENST00000479554 PODNL1Q6PEZ8 512 aa12.41□□□□□ -0.42
ATG4B-218ENST00000479554 TTC33Q6PID6 262 aaPredicted RBP12.41□□□□□ -0.42
ATG4B-218ENST00000479554 LINC00114Q6XXX2 140 aa12.41□□□□□ -0.42
ATG4B-218ENST00000479554 WDR88Q6ZMY6 472 aa12.41□□□□□ -0.42
ATG4B-218ENST00000479554 SVOPLQ8N434 492 aa12.41□□□□□ -0.42
ATG4B-218ENST00000479554 ADAMTS16Q8TE57 1224 aa12.41□□□□□ -0.42
ATG4B-218ENST00000479554 DNAJC9Q8WXX5 260 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms