RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 CXCR1P25024 350 aa22.29■■□□□ 1.16
SYNGAP1-206ENST00000479510 RFPL4BQ6ZWI9 263 aa22.29■■□□□ 1.16
SYNGAP1-206ENST00000479510 SYT4Q9H2B2 425 aa22.29■■□□□ 1.16
SYNGAP1-206ENST00000479510 PNO1Q9NRX1 252 aaKnown RBP22.29■■□□□ 1.16
SYNGAP1-206ENST00000479510 PCDHGA5Q9Y5G8 931 aa22.29■■□□□ 1.16
SYNGAP1-206ENST00000479510 GGT3PA6NGU5 568 aa22.28■■□□□ 1.16
SYNGAP1-206ENST00000479510 XKRYO14609 159 aa22.28■■□□□ 1.16
SYNGAP1-206ENST00000479510 PSMA6P60900 246 aaKnown RBP22.28■■□□□ 1.16
SYNGAP1-206ENST00000479510 IDO2Q6ZQW0 420 aa22.28■■□□□ 1.16
SYNGAP1-206ENST00000479510 MAMDC2Q7Z304 686 aaPredicted RBP22.28■■□□□ 1.16
SYNGAP1-206ENST00000479510 GKN2Q86XP6 184 aa22.28■■□□□ 1.16
SYNGAP1-206ENST00000479510 METTL27Q8N6F8 245 aaPredicted RBP22.28■■□□□ 1.16
SYNGAP1-206ENST00000479510 PIGKQ92643 395 aa22.28■■□□□ 1.16
SYNGAP1-206ENST00000479510 OR8B4Q96RC9 309 aa22.28■■□□□ 1.16
SYNGAP1-206ENST00000479510 GSX2Q9BZM3 304 aa22.28■■□□□ 1.16
SYNGAP1-206ENST00000479510 SOHLH2Q9NX45 425 aa22.28■■□□□ 1.16
SYNGAP1-206ENST00000479510 NUP50Q9UKX7 468 aa22.28■■□□□ 1.16
SYNGAP1-206ENST00000479510 IGKV3D-11A0A0A0MRZ8 115 aa22.27■■□□□ 1.16
SYNGAP1-206ENST00000479510 H7C1C5 153 aa22.27■■□□□ 1.16
SYNGAP1-206ENST00000479510 MAS1P04201 325 aa22.27■■□□□ 1.16
SYNGAP1-206ENST00000479510 ALDOBP05062 364 aa22.27■■□□□ 1.16
SYNGAP1-206ENST00000479510 KIR3DL2P43630 455 aa22.27■■□□□ 1.16
SYNGAP1-206ENST00000479510 LCN6P62502 163 aa22.27■■□□□ 1.16
SYNGAP1-206ENST00000479510 ZNF117Q03924 483 aa22.27■■□□□ 1.16
SYNGAP1-206ENST00000479510 RAB33BQ9H082 229 aa22.27■■□□□ 1.16
SYNGAP1-206ENST00000479510 CDV3Q9UKY7 258 aaKnown RBP22.27■■□□□ 1.16
SYNGAP1-206ENST00000479510 TMA7Q9Y2S6 64 aaKnown RBP22.27■■□□□ 1.16
SYNGAP1-206ENST00000479510 DLX5P56178 289 aa22.27■■□□□ 1.16
SYNGAP1-206ENST00000479510 SLC17A1Q14916 467 aa22.27■■□□□ 1.16
SYNGAP1-206ENST00000479510 OPCMLQ14982 345 aa22.27■■□□□ 1.16
SYNGAP1-206ENST00000479510 POU4F3Q15319 338 aa22.27■■□□□ 1.16
SYNGAP1-206ENST00000479510 SGCBQ16585 318 aa22.27■■□□□ 1.16
SYNGAP1-206ENST00000479510 COMMD7Q86VX2 200 aa22.27■■□□□ 1.16
SYNGAP1-206ENST00000479510 ASB13Q8WXK3 278 aa22.27■■□□□ 1.16
SYNGAP1-206ENST00000479510 MVB12AQ96EY5 273 aa22.27■■□□□ 1.16
SYNGAP1-206ENST00000479510 ADOQ96SZ5 270 aa22.27■■□□□ 1.16
SYNGAP1-206ENST00000479510 KIF25Q9UIL4 384 aa22.27■■□□□ 1.16
SYNGAP1-206ENST00000479510 UBE2QL1A1L167 161 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 OR6C65A6NJZ3 312 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 TO15178 435 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 RRASP10301 218 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 ANXA7P20073 488 aaKnown RBP22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 ROM1Q03395 351 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 ELAVL1Q15717 326 aaKnown RBP22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 PM20D2Q8IYS1 436 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 ZNF321PQ8N8H1 164 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 ZNF524Q96C55 264 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 ALG1L2C9J202 215 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 ICOSLGO75144 302 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 CTAG2O75638 210 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 TOXO94900 526 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 DDAH2O95865 285 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 CSF2RBP32927 897 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 PCGF3Q3KNV8 242 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 WDR38Q5JTN6 314 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 TEX30Q5JUR7 227 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 FAM198BQ6UWH4 519 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 SLC36A1Q7Z2H8 476 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 C17orf82Q86X59 251 aaPredicted RBP22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 ZNF679Q8IYX0 411 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 OR6N1Q8NGY5 312 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 RNF128Q8TEB7 428 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 ZNF721Q8TF20 911 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 MSANTD3Q96H12 275 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 OR8D2Q9GZM6 311 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 B9D1Q9UPM9 204 aa22.26■■□□□ 1.15
SYNGAP1-206ENST00000479510 A0A1B0GTH9 108 aa22.25■■□□□ 1.15
SYNGAP1-206ENST00000479510 B8ZZF3 427 aa22.25■■□□□ 1.15
SYNGAP1-206ENST00000479510 SLC17A2O00624 439 aa22.25■■□□□ 1.15
SYNGAP1-206ENST00000479510 HCRTR2O43614 444 aa22.25■■□□□ 1.15
SYNGAP1-206ENST00000479510 RGS11O94810 467 aa22.25■■□□□ 1.15
SYNGAP1-206ENST00000479510 TMIGD3P0DMS9 266 aaPredicted RBP22.25■■□□□ 1.15
SYNGAP1-206ENST00000479510 NME1P15531 152 aaKnown RBP22.25■■□□□ 1.15
SYNGAP1-206ENST00000479510 PGCP20142 388 aa22.25■■□□□ 1.15
SYNGAP1-206ENST00000479510 SDHBP21912 280 aa22.25■■□□□ 1.15
SYNGAP1-206ENST00000479510 IL12BP29460 328 aa22.25■■□□□ 1.15
SYNGAP1-206ENST00000479510 RAB11BQ15907 218 aa22.25■■□□□ 1.15
SYNGAP1-206ENST00000479510 SLC18B1Q6NT16 456 aa22.25■■□□□ 1.15
SYNGAP1-206ENST00000479510 OR10AC1Q8NH08 325 aa22.25■■□□□ 1.15
SYNGAP1-206ENST00000479510 CEP76Q8TAP6 659 aa22.25■■□□□ 1.15
SYNGAP1-206ENST00000479510 TSEN15Q8WW01 171 aaKnown RBP22.25■■□□□ 1.15
SYNGAP1-206ENST00000479510 CHIAQ9BZP6 476 aa22.25■■□□□ 1.15
SYNGAP1-206ENST00000479510 ELOVL3Q9HB03 270 aa22.25■■□□□ 1.15
SYNGAP1-206ENST00000479510 CUTCQ9NTM9 273 aa22.25■■□□□ 1.15
SYNGAP1-206ENST00000479510 VSX1Q9NZR4 365 aaPredicted RBP22.25■■□□□ 1.15
SYNGAP1-206ENST00000479510 IGHV5-51A0A0C4DH38 117 aa22.24■■□□□ 1.15
SYNGAP1-206ENST00000479510 LOC100289279A0A1B0GTE1 492 aa22.24■■□□□ 1.15
SYNGAP1-206ENST00000479510 PRSS37A4D1T9 235 aa22.24■■□□□ 1.15
SYNGAP1-206ENST00000479510 PRKNO60260 465 aaPredicted RBP22.24■■□□□ 1.15
SYNGAP1-206ENST00000479510 RPL27P61353 136 aaKnown RBP22.24■■□□□ 1.15
SYNGAP1-206ENST00000479510 ZNF519Q8TB69 540 aa22.24■■□□□ 1.15
SYNGAP1-206ENST00000479510 METTL21AQ8WXB1 218 aa22.24■■□□□ 1.15
SYNGAP1-206ENST00000479510 CLIP3Q96DZ5 547 aa22.24■■□□□ 1.15
SYNGAP1-206ENST00000479510 CA10Q9NS85 328 aa22.24■■□□□ 1.15
SYNGAP1-206ENST00000479510 KCNG2Q9UJ96 466 aa22.24■■□□□ 1.15
SYNGAP1-206ENST00000479510 HMSDA8MTL9 139 aa22.24■■□□□ 1.15
SYNGAP1-206ENST00000479510 PTHLHP12272 177 aa22.24■■□□□ 1.15
SYNGAP1-206ENST00000479510 GP1BBP13224 206 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms