RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 A0A0D9SG52 128 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 OR2W5A6NFC9 320 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 M6PRP20645 277 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 S100A11P31949 105 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 CAV2P51636 162 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 FABP5Q01469 135 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 RBMS2Q15434 407 aaKnown RBP13.13□□□□□ -0.31
COL20A1-206ENST00000479501 NKAIN1Q4KMZ8 207 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 RFPL4BQ6ZWI9 263 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 CD163Q86VB7 1156 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 OR2L13Q8N349 312 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 CCNL2Q96S94 520 aaPredicted RBP13.13□□□□□ -0.31
COL20A1-206ENST00000479501 VRK1Q99986 396 aaPredicted RBP13.13□□□□□ -0.31
COL20A1-206ENST00000479501 FOXQ1Q9C009 403 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 SLIRPQ9GZT3 109 aaKnown RBP13.13□□□□□ -0.31
COL20A1-206ENST00000479501 IGHV3-20A0A0C4DH32 117 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 P2RX6O15547 441 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 OIP5O43482 229 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 SLC34A2O95436 690 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 IFNA1P01562 189 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 ARL6IP1Q15041 203 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 PEA15Q15121 130 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 YIF1BQ5BJH7 314 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 PRAMEF20Q5VT98 475 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 TSLPQ969D9 159 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 SPTSSAQ969W0 71 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 ZFP57Q9NU63 452 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 SLC6A14Q9UN76 642 aa13.13□□□□□ -0.31
COL20A1-206ENST00000479501 LCATP04180 440 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 CDK2P24941 298 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 ZFP36L2P47974 494 aaKnown RBP13.12□□□□□ -0.31
COL20A1-206ENST00000479501 CCR6P51684 374 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 TAS2R31P59538 309 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 C1orf140Q5VVS0 124 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 MICU1Q9BPX6 476 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 WSB2Q9NYS7 404 aaPredicted RBP13.12□□□□□ -0.31
COL20A1-206ENST00000479501 IGHA2P01877 340 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 MELKQ14680 651 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 LIPNQ5VXI9 398 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 GRINAQ7Z429 371 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 GLB1L2Q8IW92 636 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 STEAP2Q8NFT2 490 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 SYT3Q9BQG1 590 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 PIKFYVEQ9Y2I7 2098 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 SIGLEC6O43699 453 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 CRTAPO75718 401 aaPredicted RBP13.12□□□□□ -0.31
COL20A1-206ENST00000479501 MT-ATP6P00846 226 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 ATP1B1P05026 303 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 GZMMP51124 257 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 TAS2R19P59542 299 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 CD276Q5ZPR3 534 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 ZNF425Q6IV72 752 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 KIAA0907Q7Z7F0 614 aaPredicted RBP13.12□□□□□ -0.31
COL20A1-206ENST00000479501 ZNF100Q8IYN0 542 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 NLGN4YQ8NFZ3 816 aaPredicted RBP13.12□□□□□ -0.31
COL20A1-206ENST00000479501 MVB12AQ96EY5 273 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 GABRG3Q99928 467 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 SULT4A1Q9BR01 284 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 LCTP09848 1927 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 SRMP19623 302 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 GZMKP49863 264 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 DIO1P49895 249 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 HCCSP53701 268 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 BTG1P62324 171 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 SMAD4Q13485 552 aaKnown RBP13.12□□□□□ -0.31
COL20A1-206ENST00000479501 MEF2DQ14814 521 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 SLC16A12Q6ZSM3 486 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 BPIFB2Q8N4F0 458 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 TOMM40LQ969M1 308 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 NXF5Q9H1B4 397 aaKnown RBP13.12□□□□□ -0.31
COL20A1-206ENST00000479501 CAMK2AQ9UQM7 478 aa13.12□□□□□ -0.31
COL20A1-206ENST00000479501 MYOFQ9NZM1 2061 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 C2orf72A6NCS6 295 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 PRICKLE3O43900 615 aaPredicted RBP13.11□□□□□ -0.31
COL20A1-206ENST00000479501 ALOX12BO75342 701 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 CER1O95813 267 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 PCMT1P22061 227 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 SOX18P35713 384 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 SRYQ05066 204 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 ZIC1Q15915 447 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 KIRREL2Q6UWL6 708 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 TMEM92Q6UXU6 159 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 C1orf198Q9H425 327 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 GPR55Q9Y2T6 319 aaPredicted RBP13.11□□□□□ -0.31
COL20A1-206ENST00000479501 MYO16Q9Y6X6 1858 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 TRABD2BA6NFA1 517 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 DIRAS3O95661 229 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 SPI1P17947 270 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 PER3P56645 1201 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 KDM8Q8N371 416 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 SEC22AQ96IW7 307 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 LRRC61Q9BV99 259 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 ACOXLQ9NUZ1 547 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 HOXC4P09017 264 aaPredicted RBP13.11□□□□□ -0.31
COL20A1-206ENST00000479501 PPA1Q15181 289 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 RSU1Q15404 277 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 FXNQ16595 210 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 PRSS41Q7RTY9 318 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 SLC51BQ86UW2 128 aa13.11□□□□□ -0.31
COL20A1-206ENST00000479501 IL17RDQ8NFM7 739 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms