RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 TCEA1P23193 301 aaKnown RBP5.54□□□□□ -1.52
HOXB3-209ENST00000478644 LOXP28300 417 aaPredicted RBP5.54□□□□□ -1.52
HOXB3-209ENST00000478644 CCKARP32238 428 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 CRATP43155 626 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 DIO1P49895 249 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 NANOS3P60323 173 aaKnown RBP5.54□□□□□ -1.52
HOXB3-209ENST00000478644 COPZ1P61923 177 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 KCNJ10P78508 379 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 CHRNB3Q05901 458 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 FOXF1Q12946 379 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 FADDQ13158 208 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 SKP2Q13309 424 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 CAPRIN1Q14444 709 aaKnown RBP5.54□□□□□ -1.52
HOXB3-209ENST00000478644 QPRTQ15274 297 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 SYPL1Q16563 259 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 CLEC12BQ2HXU8 276 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 GPAT3Q53EU6 434 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 SYT14P1Q58G82 188 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 RUNDC3AQ59EK9 446 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 COQ5Q5HYK3 327 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 FAM69AQ5T7M9 428 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 PODNL1Q6PEZ8 512 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 CBLN3Q6UW01 205 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 C5orf46Q6UWT4 87 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 ZNF550Q7Z398 422 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 DTX2Q86UW9 622 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 CCDC36Q8IYA8 594 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 GATSQ8NAP1 163 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 POMGNT2Q8NAT1 580 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 FAM71CQ8NEG0 241 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 POC1BQ8TC44 478 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 SLC38A5Q8WUX1 472 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 SPSB4Q96A44 273 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 APH1AQ96BI3 265 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 PERPQ96FX8 193 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 AURKBQ96GD4 344 aaPredicted RBP5.54□□□□□ -1.52
HOXB3-209ENST00000478644 HS6ST2Q96MM7 605 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 KLHDC3Q9BQ90 382 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 RHNO1Q9BSD3 238 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 THUMPD3Q9BV44 507 aaKnown RBP5.54□□□□□ -1.52
HOXB3-209ENST00000478644 C1orf43Q9BWL3 253 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 SLC38A1Q9H2H9 487 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 BCL2L10Q9HD36 194 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 MYOZ1Q9NP98 299 aaPredicted RBP5.54□□□□□ -1.52
HOXB3-209ENST00000478644 A4GALTQ9NPC4 353 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 SAR1AQ9NR31 198 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 TBCCD1Q9NVR7 557 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 ASB6Q9NWX5 421 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 TAS2R16Q9NYV7 291 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 SLC25A37Q9NYZ2 338 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 CISD1Q9NZ45 108 aaKnown RBP5.54□□□□□ -1.52
HOXB3-209ENST00000478644 TMEM181Q9P2C4 612 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 P2RX2Q9UBL9 471 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 CHRNA9Q9UGM1 479 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 LEF1Q9UJU2 399 aaPredicted RBP5.54□□□□□ -1.52
HOXB3-209ENST00000478644 LAMP3Q9UQV4 416 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 SLC9A8Q9Y2E8 581 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 AMDHD2Q9Y303 409 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 NOSIPQ9Y314 301 aaKnown RBP5.54□□□□□ -1.52
HOXB3-209ENST00000478644 NDUFAF1Q9Y375 327 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 MED12LQ86YW9 2145 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 VPS13CQ709C8 3753 aa5.54□□□□□ -1.52
HOXB3-209ENST00000478644 HRNRQ86YZ3 2850 aaPredicted RBP5.53□□□□□ -1.52
HOXB3-209ENST00000478644 MPDZO75970 2070 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 CENPVL1A0A0U1RR11 272 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 A0A1W2PPR1 153 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 CIB4A0PJX0 185 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 OR5H1A6NKK0 313 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 NDUFS8O00217 210 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 TSPAN4O14817 238 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 ANGPT2O15123 496 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 ADAM20O43506 726 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 EFNA2O43921 213 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 FMO6PO60774 539 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 NPPAP01160 153 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 CD1AP06126 327 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 DBIP07108 87 aaKnown RBP5.53□□□□□ -1.52
HOXB3-209ENST00000478644 DANCRP0C864 163 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 SLC25A16P16260 332 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 IL7RP16871 459 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 COX5AP20674 150 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 APOBEC3AP31941 199 aaPredicted RBP5.53□□□□□ -1.52
HOXB3-209ENST00000478644 SLC1A3P43003 542 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 CCR4P51679 360 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 POLR2HP52434 150 aaKnown RBP5.53□□□□□ -1.52
HOXB3-209ENST00000478644 PPP5CP53041 499 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 CRISP3P54108 245 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 DSTNP60981 165 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 DMTNQ08495 405 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 MERTKQ12866 999 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 RAB35Q15286 201 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 TAB1Q15750 504 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 TOMM34Q15785 309 aaPredicted RBP5.53□□□□□ -1.52
HOXB3-209ENST00000478644 RAB12Q6IQ22 244 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 OLIG3Q7RTU3 272 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 PEX5LQ8IYB4 626 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 FBXL14Q8N1E6 418 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 UBE2J2Q8N2K1 259 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 ZNF614Q8N883 585 aa5.53□□□□□ -1.52
HOXB3-209ENST00000478644 ZNF540Q8NDQ6 660 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms