RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 LRRC30A6NM36 301 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 ODF3BA8MYP8 253 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 KMOO15229 486 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 TRIM16O95361 564 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 TSPAN13O95857 204 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 NDUFB10O96000 172 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 F10P00742 488 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 ANXA4P09525 319 aaPredicted RBP-0.65□□□□□ -2.51
CALD1-218ENST00000478075 DTYMKP23919 212 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 MAGEA3P43357 314 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 CSNK1EP49674 416 aaKnown RBP-0.65□□□□□ -2.51
CALD1-218ENST00000478075 DAP3P51398 398 aaKnown RBP-0.65□□□□□ -2.51
CALD1-218ENST00000478075 TPMTP51580 245 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 ZNF140P52738 457 aaPredicted RBP-0.65□□□□□ -2.51
CALD1-218ENST00000478075 MYBPC1Q00872 1141 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 GFPT1Q06210 699 aaPredicted RBP-0.65□□□□□ -2.51
CALD1-218ENST00000478075 C2orf54Q08AI8 447 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 TSTA3Q13630 321 aaPredicted RBP-0.65□□□□□ -2.51
CALD1-218ENST00000478075 CHI3L2Q15782 390 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 TPRXLQ17RH7 258 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 Q5BKY6 102 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 C12orf60Q5U649 245 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 PDPK2PQ6A1A2 396 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 ACSM5Q6NUN0 579 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 CFAP161Q6P656 301 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 TMEM205Q6UW68 189 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 SLC16A13Q7RTY0 426 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 EFCAB13Q8IY85 973 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 ZNF101Q8IZC7 436 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 ZADH2Q8N4Q0 377 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 ZNF645Q8N7E2 425 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 DNAAF3Q8N9W5 541 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 OR51G2Q8NGK0 314 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 ZNRF2Q8NHG8 242 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 PNPT1Q8TCS8 783 aaKnown RBP-0.65□□□□□ -2.51
CALD1-218ENST00000478075 DEPDC1BQ8WUY9 529 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 HTR3CQ8WXA8 447 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 CMTM7Q96FZ5 175 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 IGF2BP2-AS1Q96M15 143 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 NAA38Q9BRA0 125 aaKnown RBP-0.65□□□□□ -2.51
CALD1-218ENST00000478075 THUMPD3Q9BV44 507 aaKnown RBP-0.65□□□□□ -2.51
CALD1-218ENST00000478075 TMEM59Q9BXS4 323 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 FTHL17Q9BXU8 183 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 MRPL9Q9BYD2 267 aaKnown RBP-0.65□□□□□ -2.51
CALD1-218ENST00000478075 ABCG5Q9H222 651 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 XKR8Q9H6D3 395 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 RNF167Q9H6Y7 350 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 LINC00574Q9H8X3 128 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 MED4Q9NPJ6 270 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 ANKEF1Q9NU02 776 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 FAM206AQ9NX38 181 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 AATFQ9NY61 560 aaKnown RBP eCLIP-0.65□□□□□ -2.51
CALD1-218ENST00000478075 RNF14Q9UBS8 474 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 SOX21Q9Y651 276 aaPredicted RBP-0.65□□□□□ -2.51
CALD1-218ENST00000478075 IKBKGQ9Y6K9 419 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 MDC1Q14676 2089 aaKnown RBP-0.65□□□□□ -2.51
CALD1-218ENST00000478075 ATG2BQ96BY7 2078 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 ADGRB3O60242 1522 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 ADAMTS7Q9UKP4 1686 aa-0.65□□□□□ -2.51
CALD1-218ENST00000478075 TNRC6BQ9UPQ9 1833 aaKnown RBP-0.66□□□□□ -2.51
CALD1-218ENST00000478075 COL6A3P12111 3177 aa-0.66□□□□□ -2.51
CALD1-218ENST00000478075 IGKV2-40A0A087WW87 121 aaPredicted RBP-0.66□□□□□ -2.52
CALD1-218ENST00000478075 A0A1B0GUS0 222 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 A8MWP4 228 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 C9JVG2 144 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 LOC110117498-PIK3R3F6TDL0 507 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 H0Y626 953 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 CPSF4O95639 269 aaKnown RBP-0.66□□□□□ -2.52
CALD1-218ENST00000478075 RAB36O95755 333 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 CYB5R3P00387 301 aaPredicted RBP-0.66□□□□□ -2.52
CALD1-218ENST00000478075 IGKV2D-40P01614 121 aaPredicted RBP-0.66□□□□□ -2.52
CALD1-218ENST00000478075 GAPDHP04406 335 aaKnown RBP-0.66□□□□□ -2.52
CALD1-218ENST00000478075 FABP3P05413 133 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 ACSM4P0C7M7 580 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 UBTFL6P0CB48 400 aaPredicted RBP-0.66□□□□□ -2.52
CALD1-218ENST00000478075 IL9P15248 144 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 ME2P23368 584 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 CASP14P31944 242 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 AQP2P41181 271 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 EPS15P42566 896 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 RAD52P43351 418 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 KLF3P57682 345 aaPredicted RBP-0.66□□□□□ -2.52
CALD1-218ENST00000478075 PPP1CBP62140 327 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 CD164Q04900 197 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 AQP6Q13520 282 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 VGLL4Q14135 290 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 PON3Q15166 354 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 HFEQ30201 348 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 BEND3Q5T5X7 828 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 C22orf42Q6IC83 251 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 FAM159AQ6UWV7 190 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 CYHR1Q6ZMK1 362 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 LPCAT2Q7L5N7 544 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 ASCL5Q7RTU5 278 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 ZNF546Q86UE3 836 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 LHFPL3Q86UP9 236 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 EGFL6Q8IUX8 553 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 C15orf53Q8NAA6 179 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 OR4S2Q8NH73 311 aa-0.66□□□□□ -2.52
CALD1-218ENST00000478075 TNFRSF14Q92956 283 aa-0.66□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms