RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 TOR3AQ9H497 397 aa6.08□□□□□ -1.44
SPTLC1-205ENST00000477888 NANOGQ9H9S0 305 aa6.08□□□□□ -1.44
SPTLC1-205ENST00000477888 CYSLTR2Q9NS75 346 aa6.08□□□□□ -1.44
SPTLC1-205ENST00000477888 ACOXLQ9NUZ1 547 aa6.08□□□□□ -1.44
SPTLC1-205ENST00000477888 EXD2Q9NVH0 621 aa6.08□□□□□ -1.44
SPTLC1-205ENST00000477888 TMEM216Q9P0N5 145 aa6.08□□□□□ -1.44
SPTLC1-205ENST00000477888 PRDM4Q9UKN5 801 aa6.08□□□□□ -1.44
SPTLC1-205ENST00000477888 ZDHHC8Q9ULC8 765 aa6.08□□□□□ -1.44
SPTLC1-205ENST00000477888 TRIM33Q9UPN9 1127 aa6.08□□□□□ -1.44
SPTLC1-205ENST00000477888 FOXJ3Q9UPW0 622 aa6.08□□□□□ -1.44
SPTLC1-205ENST00000477888 POFUT2Q9Y2G5 429 aa6.08□□□□□ -1.44
SPTLC1-205ENST00000477888 PPP2R2CQ9Y2T4 447 aa6.08□□□□□ -1.44
SPTLC1-205ENST00000477888 PCDHGB5Q9Y5G0 923 aa6.08□□□□□ -1.44
SPTLC1-205ENST00000477888 PCLOQ9Y6V0 5065 aa6.08□□□□□ -1.44
SPTLC1-205ENST00000477888 A0A0U1RQK1 487 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 PLSCR5A0PG75 271 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 RNASEK-C17orf49H0YIS7 233 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 J3QL48 77 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 SLC28A1O00337 649 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 OR12D1P0DN82 309 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 IGLL1P15814 213 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 CDC25BP30305 580 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 LIPAP38571 399 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 MPV17P39210 176 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 ACAA2P42765 397 aaKnown RBP6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 PCBP3P57721 371 aaKnown RBP6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 KRTAP10-11P60412 298 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 EGR4Q05215 589 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 C2orf54Q08AI8 447 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 C1DQ13901 141 aaKnown RBP6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 TTMPQ5BVD1 217 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 THEM4Q5T1C6 240 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 LIPMQ5VYY2 423 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 CARD17Q5XLA6 110 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 PGBD2Q6P3X8 592 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 PIWIL3Q7Z3Z3 882 aaKnown RBP6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 KLBQ86Z14 1044 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 SLC22A9Q8IVM8 553 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 LINC00528Q8N1L1 170 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 CLEC4FQ8N1N0 589 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 MUC20Q8N307 709 aaPredicted RBP6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 SLC35F6Q8N357 371 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 NATD1Q8N6N6 113 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 ICA1LQ8NDH6 482 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 OR4S1Q8NGB4 309 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 OR1J1Q8NGS3 322 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 STK35Q8TDR2 534 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 C10orf82Q8WW14 230 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 XAGE5Q8WWM1 108 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 IPCEF1Q8WWN9 437 aaPredicted RBP6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 ROPN1LQ96C74 230 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 SLC25A36Q96CQ1 311 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 SAMD8Q96LT4 415 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 ARHGDIGQ99819 225 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 NUDT16L1Q9BRJ7 211 aaKnown RBP6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 EMC6Q9BV81 110 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 MMP28Q9H239 520 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 OR51I1Q9H343 314 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 DPAGT1Q9H3H5 408 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 CDH20Q9HBT6 801 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 SIGLEC9Q9Y336 463 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 TMED5Q9Y3A6 229 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 USH1CQ9Y6N9 552 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 U3KQK5 164 aa6.07□□□□□ -1.44
SPTLC1-205ENST00000477888 A0A096LPI6 279 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 B2RBV5 119 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 MS4A18H0YCH9 400 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 H3BQF6 201 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 TMEM178BH3BS89 294 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 P2RY10O00398 339 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 LSM1O15116 133 aaKnown RBP6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 NPHS1O60500 1241 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 AGR2O95994 175 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 NHLRC4P0CG21 123 aaPredicted RBP6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 HLA-DOBP13765 273 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 MMP9P14780 707 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 UQCRBP14927 111 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 TCP1P17987 556 aaKnown RBP6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 GABRA5P31644 462 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 CFHR2P36980 270 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 RPL3P39023 403 aaKnown RBP6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 ANP32AP39687 249 aaKnown RBP6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 RPS5P46782 204 aaKnown RBP6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 EFNB2P52799 333 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 PLTPP55058 493 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 GNB2P62879 340 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 RPL38P63173 70 aaKnown RBP6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 TNFAIP6P98066 277 aaPredicted RBP6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 EMX1Q04741 257 aaPredicted RBP6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 CDK5R2Q13319 367 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 MS4A18Q3C1V0 323 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 ZNF718Q3SXZ3 478 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 KLHL22Q53GT1 634 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 MBNL2Q5VZF2 373 aaKnown RBP6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 WBP2NLQ6ICG8 309 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 SLC27A4Q6P1M0 643 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 SNX32Q86XE0 403 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 ZNF101Q8IZC7 436 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 LYG1Q8N1E2 194 aa6.06□□□□□ -1.44
SPTLC1-205ENST00000477888 SLC22A24Q8N4F4 322 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms