RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 C17orf78Q8N4C9 275 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 PNLDC1Q8NA58 520 aaKnown RBP3.92□□□□□ -1.78
CKS1B-207ENST00000477676 OR9K2Q8NGE7 335 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 OR1K1Q8NGR3 316 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 PIGXQ8TBF5 258 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 SFXN5Q8TD22 340 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 ACMSDQ8TDX5 336 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 IFT81Q8WYA0 676 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 OR5P2Q8WZ92 322 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 YIPF5Q969M3 257 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 TMEM45BQ96B21 275 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 MTERF3Q96E29 417 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 DAZAP1Q96EP5 407 aaKnown RBP3.92□□□□□ -1.78
CKS1B-207ENST00000477676 SLC38A2Q96QD8 506 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 FMO2Q99518 471 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 C1orf50Q9BV19 199 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 RSPO3Q9BXY4 272 aaPredicted RBP3.92□□□□□ -1.78
CKS1B-207ENST00000477676 METTL17Q9H7H0 456 aaPredicted RBP3.92□□□□□ -1.78
CKS1B-207ENST00000477676 FKRPQ9H9S5 495 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 NOX3Q9HBY0 568 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 GPR35Q9HC97 309 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 PNPOQ9NVS9 261 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 EMC3Q9P0I2 261 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 TMEM181Q9P2C4 612 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 MYEF2Q9P2K5 600 aaKnown RBP3.92□□□□□ -1.78
CKS1B-207ENST00000477676 CHRNA9Q9UGM1 479 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 TBK1Q9UHD2 729 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 OSGIN1Q9UJX0 560 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 ZDHHC8Q9ULC8 765 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 TRAPPC4Q9Y296 219 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 AMDHD2Q9Y303 409 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 TMED7Q9Y3B3 224 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 HDGFL3Q9Y3E1 203 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 FKBP7Q9Y680 259 aa3.92□□□□□ -1.78
CKS1B-207ENST00000477676 DYNC2H1Q8NCM8 4307 aaKnown RBP3.92□□□□□ -1.78
CKS1B-207ENST00000477676 ARPC4-TTLL3A0A0A6YYG9 625 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 IGHV2OR16-5A0A0B4J2B6 119 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 SH3PXD2BA1X283 911 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 LIPT2A6NK58 231 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 hCG_2039718K7EN88 272 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 F2RL2O00254 374 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 SOCS2O14508 198 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 GPR171O14626 319 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 DNPH1O43598 174 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 PIP5K1CO60331 668 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 PEX11AO75192 247 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 STX11O75558 287 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 SKAP2O75563 359 aaPredicted RBP3.91□□□□□ -1.78
CKS1B-207ENST00000477676 UPK3AO75631 287 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 PDE5AO76074 875 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 ZNF432O94892 652 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 IGKV3-15P01624 115 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 SHBGP04278 402 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 FGF4P08620 206 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 ADRA2AP08913 450 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 OR12D1P0DN82 309 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 MATN1P21941 496 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 CASQ1P31415 396 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 APOBEC1P41238 236 aaKnown RBP3.91□□□□□ -1.78
CKS1B-207ENST00000477676 IDH2P48735 452 aaKnown RBP3.91□□□□□ -1.78
CKS1B-207ENST00000477676 DVL1P1P54792 670 aaPredicted RBP3.91□□□□□ -1.78
CKS1B-207ENST00000477676 SNRPD2P62316 118 aaKnown RBP3.91□□□□□ -1.78
CKS1B-207ENST00000477676 BNIP2Q12982 314 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 ZNF260Q3ZCT1 412 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 PDLIM3Q53GG5 364 aaPredicted RBP3.91□□□□□ -1.78
CKS1B-207ENST00000477676 AWAT1Q58HT5 328 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 C6orf136Q5SQH8 315 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 AWAT2Q6E213 333 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 OR4F3Q6IEY1 312 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 TNFAIP8L2Q6P589 184 aaPredicted RBP3.91□□□□□ -1.78
CKS1B-207ENST00000477676 BHLHB9Q6PI77 547 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 SLC2A7Q6PXP3 512 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 PAQR6Q6TCH4 344 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 EIF3MQ7L2H7 374 aaKnown RBP3.91□□□□□ -1.78
CKS1B-207ENST00000477676 GRINAQ7Z429 371 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 LRP11Q86VZ4 500 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 EPHX4Q8IUS5 362 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 ZDHHC22Q8N966 263 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 CLDND2Q8NHS1 167 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 RP9Q8TA86 221 aaKnown RBP3.91□□□□□ -1.78
CKS1B-207ENST00000477676 MIPOL1Q8TD10 442 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 FAM216AQ8WUB2 273 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 ZFAND2BQ8WV99 257 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 TWIST2Q8WVJ9 160 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 TAF15Q92804 592 aaKnown RBP eCLIP3.91□□□□□ -1.78
CKS1B-207ENST00000477676 RAB8BQ92930 207 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 AURKBQ96GD4 344 aaPredicted RBP3.91□□□□□ -1.78
CKS1B-207ENST00000477676 ZNF75AQ96N20 296 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 ALKBH3Q96Q83 286 aaPredicted RBP3.91□□□□□ -1.78
CKS1B-207ENST00000477676 MECRQ9BV79 373 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 KATNB1Q9BVA0 655 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 C1QTNF5Q9BXJ0 243 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 QTRT1Q9BXR0 403 aaKnown RBP3.91□□□□□ -1.78
CKS1B-207ENST00000477676 SLC38A1Q9H2H9 487 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 OR51I1Q9H343 314 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 TPK1Q9H3S4 243 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 NARFLQ9H6Q4 476 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 GRPEL1Q9HAV7 217 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 LPAR2Q9HBW0 351 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 MYOZ1Q9NP98 299 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms