RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 HPSE2Q8WWQ2 592 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 URM1Q9BTM9 101 aaKnown RBP11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 POTEKPQ9BYX7 375 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 TMEM231Q9H6L2 316 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 BRF2Q9HAW0 419 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 LAMA3Q16787 3333 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 OTOL1A6NHN0 477 aaPredicted RBP11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 AHRRA9YTQ3 701 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 F13BP05160 661 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 HSD3B1P14060 373 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 CD82P27701 267 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 ZNF84P51523 738 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 CDH12P55289 794 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 GINS1Q14691 196 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 XKR6Q5GH73 641 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 C1orf94Q6P1W5 598 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 SFXN4Q6P4A7 337 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 IL27RAQ6UWB1 636 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 ZNF765Q7L2R6 523 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 TSEN54Q7Z6J9 526 aaKnown RBP11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 ZNF485Q8NCK3 441 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 OR1J1Q8NGS3 322 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 OR4C6Q8NH72 309 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 ASB11Q8WXH4 323 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 TAAR8Q969N4 342 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 DTD2Q96FN9 168 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 ZNF845Q96IR2 970 aaPredicted RBP11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 OR2M4Q96R27 311 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 OR2AG1Q9H205 316 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 A4GNTQ9UNA3 340 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 RASD1Q9Y272 281 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 ASF1AQ9Y294 204 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 PUS1Q9Y606 427 aaKnown RBP eCLIP11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 TRAV14DV4A0A0A6YYC5 116 aa11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 ZNF749O43361 778 aa11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 RGS9O75916 674 aaPredicted RBP11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 AHSA1O95433 338 aa11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 NR2F1P10589 423 aa11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 OSMP13725 252 aa11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 ADH6P28332 368 aa11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 CCR8P51685 355 aa11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 MYO9BQ13459 2157 aa11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 FAM189A2Q15884 450 aa11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 OR2A2Q6IF42 318 aa11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 ZNF774Q6NX45 483 aa11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 CEACAM20Q6UY09 585 aa11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 ZNF620Q6ZNG0 422 aa11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 LRRC70Q7Z2Q7 622 aa11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 SLC30A7Q8NEW0 376 aa11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 FAM216AQ8WUB2 273 aa11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 NUDT8Q8WV74 236 aa11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 HLA-CQ95604 372 aa11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 ISOC2Q96AB3 205 aa11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 SGCZQ96LD1 299 aa11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 ZFP3Q96NJ6 502 aa11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 RCE1Q9Y256 329 aa11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 FAM96BQ9Y3D0 163 aa11.56□□□□□ -0.56
RTFDC1-207ENST00000477573 GSAPA4D1B5 854 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 PGRMC2O15173 223 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 RNF13O43567 381 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 MTX2O75431 263 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 CA11O75493 328 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 CNOT4O95628 575 aaKnown RBP11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 GCGP01275 180 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 SOD3P08294 240 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 TPT1P13693 172 aaKnown RBP11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 S100A3P33764 101 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 GJA4P35212 333 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 NKX6-1P78426 367 aaPredicted RBP11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 DLK1P80370 383 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 MESP2Q0VG99 397 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 C18orf21Q32NC0 220 aaPredicted RBP11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 NKAIN1Q4KMZ8 207 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 OR2G6Q5TZ20 316 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 SSX7Q7RTT5 188 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 SLC36A1Q7Z2H8 476 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 NR2C2APQ86WQ0 139 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 VRK2Q86Y07 508 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 JAGN1Q8N5M9 183 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 PIGKQ92643 395 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 GTPBP3Q969Y2 492 aaKnown RBP11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 TMEM159Q96B96 161 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 CPNE2Q96FN4 548 aaPredicted RBP11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 ADAD1Q96M93 576 aaKnown RBP11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 WDR92Q96MX6 357 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 YPEL4Q96NS1 127 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 CDK15Q96Q40 435 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 OR5B2Q96R09 309 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 SLC32A1Q9H598 525 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 EXO5Q9H790 373 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 ZFP30Q9Y2G7 519 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 MAP4K5Q9Y4K4 846 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 FAM157AC9JC47 383 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 SMPD2O60906 423 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 FBXO24O75426 580 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 SLCO2B1O94956 709 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 IL18BPO95998 194 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 GZMBP10144 247 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 ACP2P11117 423 aa11.55□□□□□ -0.56
RTFDC1-207ENST00000477573 FABP4P15090 132 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms