RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 ADORA3P0DMS8 318 aa15.41■□□□□ 0.06
PTPN7-209ENST00000477554 ANXA8P13928 327 aa15.41■□□□□ 0.06
PTPN7-209ENST00000477554 CDKN1AP38936 164 aa15.41■□□□□ 0.06
PTPN7-209ENST00000477554 NKX6-1P78426 367 aaPredicted RBP15.41■□□□□ 0.06
PTPN7-209ENST00000477554 RUNX1T1Q06455 604 aa15.41■□□□□ 0.06
PTPN7-209ENST00000477554 SEC23BQ15437 767 aa15.41■□□□□ 0.06
PTPN7-209ENST00000477554 CEACAM16Q2WEN9 425 aa15.41■□□□□ 0.06
PTPN7-209ENST00000477554 TBPL2Q6SJ96 375 aa15.41■□□□□ 0.06
PTPN7-209ENST00000477554 C20orf204Q6ZNR8 217 aa15.41■□□□□ 0.06
PTPN7-209ENST00000477554 P2RY8Q86VZ1 359 aa15.41■□□□□ 0.06
PTPN7-209ENST00000477554 CIARTQ8N365 385 aaPredicted RBP15.41■□□□□ 0.06
PTPN7-209ENST00000477554 ZNF611Q8N823 705 aa15.41■□□□□ 0.06
PTPN7-209ENST00000477554 SCAIQ8N9R8 606 aa15.41■□□□□ 0.06
PTPN7-209ENST00000477554 SMR3AQ99954 134 aa15.41■□□□□ 0.06
PTPN7-209ENST00000477554 LINC00470Q9BZP3 86 aa15.41■□□□□ 0.06
PTPN7-209ENST00000477554 GABARAPL1Q9H0R8 117 aa15.41■□□□□ 0.06
PTPN7-209ENST00000477554 VCXQ9H320 206 aa15.41■□□□□ 0.06
PTPN7-209ENST00000477554 GSX1Q9H4S2 264 aaPredicted RBP15.41■□□□□ 0.06
PTPN7-209ENST00000477554 NOX3Q9HBY0 568 aa15.41■□□□□ 0.06
PTPN7-209ENST00000477554 CRLF2Q9HC73 371 aa15.41■□□□□ 0.06
PTPN7-209ENST00000477554 DLL4Q9NR61 685 aa15.41■□□□□ 0.06
PTPN7-209ENST00000477554 MGAT4BQ9UQ53 548 aa15.41■□□□□ 0.06
PTPN7-209ENST00000477554 TMEM5Q9Y2B1 443 aa15.41■□□□□ 0.06
PTPN7-209ENST00000477554 CORINQ9Y5Q5 1042 aa15.41■□□□□ 0.06
PTPN7-209ENST00000477554 HEATR1Q9H583 2144 aaKnown RBP15.4■□□□□ 0.06
PTPN7-209ENST00000477554 PLCE1Q9P212 2302 aa15.4■□□□□ 0.06
PTPN7-209ENST00000477554 NDUFS7O75251 213 aa15.4■□□□□ 0.06
PTPN7-209ENST00000477554 IFNGR1P15260 489 aa15.4■□□□□ 0.06
PTPN7-209ENST00000477554 PEX2P28328 305 aa15.4■□□□□ 0.06
PTPN7-209ENST00000477554 PTDSS1P48651 473 aaKnown RBP15.4■□□□□ 0.06
PTPN7-209ENST00000477554 CDH11P55287 796 aa15.4■□□□□ 0.06
PTPN7-209ENST00000477554 LAPTM4AQ15012 233 aa15.4■□□□□ 0.06
PTPN7-209ENST00000477554 Q5PR19 223 aa15.4■□□□□ 0.06
PTPN7-209ENST00000477554 LPCAT4Q643R3 524 aa15.4■□□□□ 0.06
PTPN7-209ENST00000477554 OR7E24Q6IFN5 339 aa15.4■□□□□ 0.06
PTPN7-209ENST00000477554 NRMQ8IXM6 262 aa15.4■□□□□ 0.06
PTPN7-209ENST00000477554 C20orf196Q8IYI0 205 aa15.4■□□□□ 0.06
PTPN7-209ENST00000477554 HS3ST5Q8IZT8 346 aa15.4■□□□□ 0.06
PTPN7-209ENST00000477554 C1orf162Q8NEQ5 155 aaPredicted RBP15.4■□□□□ 0.06
PTPN7-209ENST00000477554 MOSPD2Q8NHP6 518 aa15.4■□□□□ 0.06
PTPN7-209ENST00000477554 RBM4BQ9BQ04 359 aaKnown RBP15.4■□□□□ 0.06
PTPN7-209ENST00000477554 RBM4Q9BWF3 364 aaKnown RBP15.4■□□□□ 0.06
PTPN7-209ENST00000477554 ZNF556Q9HAH1 456 aa15.4■□□□□ 0.06
PTPN7-209ENST00000477554 KIF17Q9P2E2 1029 aa15.4■□□□□ 0.06
PTPN7-209ENST00000477554 RCE1Q9Y256 329 aa15.4■□□□□ 0.06
PTPN7-209ENST00000477554 IGHV1-18A0A0C4DH31 117 aa15.39■□□□□ 0.05
PTPN7-209ENST00000477554 SMPD2O60906 423 aa15.39■□□□□ 0.05
PTPN7-209ENST00000477554 SLC43A1O75387 559 aa15.39■□□□□ 0.05
PTPN7-209ENST00000477554 PRKACGP22612 351 aa15.39■□□□□ 0.05
PTPN7-209ENST00000477554 PTH2RP49190 550 aa15.39■□□□□ 0.05
PTPN7-209ENST00000477554 BIDP55957 195 aa15.39■□□□□ 0.05
PTPN7-209ENST00000477554 PRKCDQ05655 676 aa15.39■□□□□ 0.05
PTPN7-209ENST00000477554 LRRC36Q1X8D7 754 aa15.39■□□□□ 0.05
PTPN7-209ENST00000477554 ZNF770Q6IQ21 691 aaPredicted RBP15.39■□□□□ 0.05
PTPN7-209ENST00000477554 C1orf94Q6P1W5 598 aa15.39■□□□□ 0.05
PTPN7-209ENST00000477554 CBR4Q8N4T8 237 aa15.39■□□□□ 0.05
PTPN7-209ENST00000477554 PACRGLQ8N7B6 248 aa15.39■□□□□ 0.05
PTPN7-209ENST00000477554 ATG16L2Q8NAA4 619 aa15.39■□□□□ 0.05
PTPN7-209ENST00000477554 AQP11Q8NBQ7 271 aa15.39■□□□□ 0.05
PTPN7-209ENST00000477554 OR9Q2Q8NGE9 314 aa15.39■□□□□ 0.05
PTPN7-209ENST00000477554 SMAP2Q8WU79 429 aaPredicted RBP15.39■□□□□ 0.05
PTPN7-209ENST00000477554 DNAJC9Q8WXX5 260 aa15.39■□□□□ 0.05
PTPN7-209ENST00000477554 FBXW5Q969U6 566 aa15.39■□□□□ 0.05
PTPN7-209ENST00000477554 GTPBP3Q969Y2 492 aaKnown RBP15.39■□□□□ 0.05
PTPN7-209ENST00000477554 FEVQ99581 238 aa15.39■□□□□ 0.05
PTPN7-209ENST00000477554 NANSQ9NR45 359 aa15.39■□□□□ 0.05
PTPN7-209ENST00000477554 CISD1Q9NZ45 108 aaKnown RBP15.39■□□□□ 0.05
PTPN7-209ENST00000477554 ZANQ9Y493 2812 aa15.39■□□□□ 0.05
PTPN7-209ENST00000477554 MTORP42345 2549 aa15.38■□□□□ 0.05
PTPN7-209ENST00000477554 ATP6V1G2-DDX39BF2Z307 99 aa15.38■□□□□ 0.05
PTPN7-209ENST00000477554 BLOC1S5-TXNDC5H3BN57 136 aa15.38■□□□□ 0.05
PTPN7-209ENST00000477554 RPL36A-HNRNPH2H7BZ11 118 aa15.38■□□□□ 0.05
PTPN7-209ENST00000477554 MT-ATP6P00846 226 aa15.38■□□□□ 0.05
PTPN7-209ENST00000477554 F13BP05160 661 aa15.38■□□□□ 0.05
PTPN7-209ENST00000477554 IFI30P13284 250 aa15.38■□□□□ 0.05
PTPN7-209ENST00000477554 CD99P14209 185 aa15.38■□□□□ 0.05
PTPN7-209ENST00000477554 MAKP20794 623 aa15.38■□□□□ 0.05
PTPN7-209ENST00000477554 AQP2P41181 271 aa15.38■□□□□ 0.05
PTPN7-209ENST00000477554 ALDH3A2P51648 485 aa15.38■□□□□ 0.05
PTPN7-209ENST00000477554 RPL18Q07020 188 aaKnown RBP15.38■□□□□ 0.05
PTPN7-209ENST00000477554 DAG1Q14118 895 aa15.38■□□□□ 0.05
PTPN7-209ENST00000477554 MFSD13AQ14CX5 517 aa15.38■□□□□ 0.05
PTPN7-209ENST00000477554 PGBD2Q6P3X8 592 aa15.38■□□□□ 0.05
PTPN7-209ENST00000477554 PXKQ7Z7A4 578 aa15.38■□□□□ 0.05
PTPN7-209ENST00000477554 GNPDA2Q8TDQ7 276 aa15.38■□□□□ 0.05
PTPN7-209ENST00000477554 NRG4Q8WWG1 115 aa15.38■□□□□ 0.05
PTPN7-209ENST00000477554 PIGTQ969N2 578 aa15.38■□□□□ 0.05
PTPN7-209ENST00000477554 BPIFA2Q96DR5 249 aa15.38■□□□□ 0.05
PTPN7-209ENST00000477554 USB1Q9BQ65 265 aaKnown RBP15.38■□□□□ 0.05
PTPN7-209ENST00000477554 DGCR6LQ9BY27 220 aa15.38■□□□□ 0.05
PTPN7-209ENST00000477554 FKRPQ9H9S5 495 aa15.38■□□□□ 0.05
PTPN7-209ENST00000477554 NGBQ9NPG2 151 aa15.38■□□□□ 0.05
PTPN7-209ENST00000477554 USE1Q9NZ43 259 aa15.38■□□□□ 0.05
PTPN7-209ENST00000477554 TRIM64A6NGJ6 449 aa15.37■□□□□ 0.05
PTPN7-209ENST00000477554 TRIM64BA6NI03 449 aa15.37■□□□□ 0.05
PTPN7-209ENST00000477554 SOCS2O14508 198 aa15.37■□□□□ 0.05
PTPN7-209ENST00000477554 EI24O14681 340 aa15.37■□□□□ 0.05
PTPN7-209ENST00000477554 RNF13O43567 381 aa15.37■□□□□ 0.05
PTPN7-209ENST00000477554 OR7A10O76100 309 aa15.37■□□□□ 0.05
PTPN7-209ENST00000477554 GASTP01350 101 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms