RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 SLC27A4Q6P1M0 643 aa13.52□□□□□ -0.25
SEC13-215ENST00000477547 Q6ZT83 130 aa13.52□□□□□ -0.25
SEC13-215ENST00000477547 BEND4Q6ZU67 534 aa13.52□□□□□ -0.25
SEC13-215ENST00000477547 JAZF1Q86VZ6 243 aa13.52□□□□□ -0.25
SEC13-215ENST00000477547 C20orf196Q8IYI0 205 aa13.52□□□□□ -0.25
SEC13-215ENST00000477547 LNX2Q8N448 690 aa13.52□□□□□ -0.25
SEC13-215ENST00000477547 SYT14Q8NB59 555 aa13.52□□□□□ -0.25
SEC13-215ENST00000477547 KCNK17Q96T54 332 aa13.52□□□□□ -0.25
SEC13-215ENST00000477547 ALG12Q9BV10 488 aa13.52□□□□□ -0.25
SEC13-215ENST00000477547 RBM24Q9BX46 236 aaKnown RBP13.52□□□□□ -0.25
SEC13-215ENST00000477547 LINC00470Q9BZP3 86 aa13.52□□□□□ -0.25
SEC13-215ENST00000477547 SLC25A19Q9HC21 320 aa13.52□□□□□ -0.25
SEC13-215ENST00000477547 C8orf4Q9NR00 106 aa13.52□□□□□ -0.25
SEC13-215ENST00000477547 GALNT8Q9NY28 637 aa13.52□□□□□ -0.25
SEC13-215ENST00000477547 JKAMPQ9P055 326 aa13.52□□□□□ -0.25
SEC13-215ENST00000477547 FOXD3Q9UJU5 478 aaPredicted RBP13.52□□□□□ -0.25
SEC13-215ENST00000477547 ADGRG4Q8IZF6 3080 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 A8MXE2 369 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 CENPBD1B2RD01 187 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 IMPA2O14732 288 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 IDH3BO43837 385 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 CNOT4O95628 575 aaKnown RBP13.51□□□□□ -0.25
SEC13-215ENST00000477547 HIST1H1CP16403 213 aaKnown RBP13.51□□□□□ -0.25
SEC13-215ENST00000477547 COX5AP20674 150 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 GRK5P34947 590 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 ROR2Q01974 943 aaKnown RBP13.51□□□□□ -0.25
SEC13-215ENST00000477547 FMODQ06828 376 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 ITGADQ13349 1161 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 GINS1Q14691 196 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 PHYHD1Q5SRE7 291 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 SLC35F1Q5T1Q4 408 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 ZNF474Q6S9Z5 364 aaPredicted RBP13.51□□□□□ -0.25
SEC13-215ENST00000477547 PTCHD4Q6ZW05 846 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 ABHD12BQ7Z5M8 362 aaPredicted RBP13.51□□□□□ -0.25
SEC13-215ENST00000477547 GABRG1Q8N1C3 465 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 GALNT4Q8N4A0 578 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 PACRGLQ8N7B6 248 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 SDR9C7Q8NEX9 313 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 OR4K13Q8NH42 304 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 TMEM54Q969K7 222 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 LRRC46Q96FV0 321 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 MRPL13Q9BYD1 178 aaKnown RBP13.51□□□□□ -0.25
SEC13-215ENST00000477547 VCXQ9H320 206 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 KCNJ16Q9NPI9 418 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 ASB6Q9NWX5 421 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 GLTPQ9NZD2 209 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 AKAP9Q99996 3911 aa13.51□□□□□ -0.25
SEC13-215ENST00000477547 APCP25054 2843 aa13.5□□□□□ -0.25
SEC13-215ENST00000477547 CELSR1Q9NYQ6 3014 aa13.5□□□□□ -0.25
SEC13-215ENST00000477547 RIIAD1A6NNX1 92 aa13.5□□□□□ -0.25
SEC13-215ENST00000477547 IFNGP01579 166 aa13.5□□□□□ -0.25
SEC13-215ENST00000477547 EPHA2P29317 976 aa13.5□□□□□ -0.25
SEC13-215ENST00000477547 MYBPC1Q00872 1141 aa13.5□□□□□ -0.25
SEC13-215ENST00000477547 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.5□□□□□ -0.25
SEC13-215ENST00000477547 NPRL3Q12980 569 aa13.5□□□□□ -0.25
SEC13-215ENST00000477547 PTGES3Q15185 160 aaKnown RBP13.5□□□□□ -0.25
SEC13-215ENST00000477547 ZIK1Q3SY52 487 aaPredicted RBP13.5□□□□□ -0.25
SEC13-215ENST00000477547 FBXL19-AS1Q494R0 122 aa13.5□□□□□ -0.25
SEC13-215ENST00000477547 C9orf135Q5VTT2 229 aa13.5□□□□□ -0.25
SEC13-215ENST00000477547 TMEM236Q5W0B7 351 aa13.5□□□□□ -0.25
SEC13-215ENST00000477547 LEG1Q6P5S2 330 aa13.5□□□□□ -0.25
SEC13-215ENST00000477547 LINGO2Q7L985 606 aa13.5□□□□□ -0.25
SEC13-215ENST00000477547 OR52E2Q8NGJ4 325 aa13.5□□□□□ -0.25
SEC13-215ENST00000477547 MARVELD3Q96A59 401 aa13.5□□□□□ -0.25
SEC13-215ENST00000477547 LRR1Q96L50 414 aa13.5□□□□□ -0.25
SEC13-215ENST00000477547 MBOAT4Q96T53 435 aa13.5□□□□□ -0.25
SEC13-215ENST00000477547 TEX12Q9BXU0 123 aa13.5□□□□□ -0.25
SEC13-215ENST00000477547 PRRG3Q9BZD7 231 aa13.5□□□□□ -0.25
SEC13-215ENST00000477547 TOR3AQ9H497 397 aa13.5□□□□□ -0.25
SEC13-215ENST00000477547 SMPD3Q9NY59 655 aaPredicted RBP13.5□□□□□ -0.25
SEC13-215ENST00000477547 PRSS37A4D1T9 235 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 ZAR1LA6NP61 321 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 LYZL6O75951 148 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 SLC2A10O95528 541 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 RENP00797 406 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 ITGA5P08648 1049 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 ZNF3P17036 446 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 IGHV1-2P23083 117 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 CCKARP32238 428 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 CD79BP40259 229 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 GIPRP48546 466 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 CDK5Q00535 292 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 HIST3H3Q16695 136 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 CEACAM16Q2WEN9 425 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 SLX4IPQ5VYV7 408 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 CXorf67Q86X51 503 aaPredicted RBP13.49□□□□□ -0.25
SEC13-215ENST00000477547 FNDC8Q8TC99 324 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 NRG4Q8WWG1 115 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 RNASE6Q93091 150 aaKnown RBP13.49□□□□□ -0.25
SEC13-215ENST00000477547 PLEKHA8Q96JA3 519 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 SLC38A2Q96QD8 506 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 NMNAT3Q96T66 252 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 SYT4Q9H2B2 425 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 FN3KQ9H479 309 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 CRLF2Q9HC73 371 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 GPR35Q9HC97 309 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 CMC2Q9NRP2 79 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 TAS2R16Q9NYV7 291 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 KLHL21Q9UJP4 597 aa13.49□□□□□ -0.25
SEC13-215ENST00000477547 ITPR3Q14573 2671 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms