RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 SYT9Q86SS6 491 aa13.35□□□□□ -0.27
HDAC6-220ENST00000477528 CSNK2A3Q8NEV1 391 aa13.35□□□□□ -0.27
HDAC6-220ENST00000477528 STT3BQ8TCJ2 826 aa13.35□□□□□ -0.27
HDAC6-220ENST00000477528 EDAQ92838 391 aa13.35□□□□□ -0.27
HDAC6-220ENST00000477528 ERVMER34-1Q9H9K5 563 aa13.35□□□□□ -0.27
HDAC6-220ENST00000477528 MCCC2Q9HCC0 563 aa13.35□□□□□ -0.27
HDAC6-220ENST00000477528 GREB1Q4ZG55 1949 aa13.35□□□□□ -0.27
HDAC6-220ENST00000477528 TEX46H3BTG2 121 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 GLB1P16278 677 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 SLC35A1P78382 337 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 ZNF770Q6IQ21 691 aaPredicted RBP13.34□□□□□ -0.27
HDAC6-220ENST00000477528 BPIFB2Q8N4F0 458 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 IL17RDQ8NFM7 739 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 OR4C3Q8NH37 302 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 NPRL2Q8WTW4 380 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 DHRS1Q96LJ7 313 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 CDC6Q99741 560 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 PCED1AQ9H1Q7 454 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 CHRDQ9H2X0 955 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 OR52A1Q9UKL2 312 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 TRPM7Q96QT4 1865 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 IFITM5A6NNB3 132 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 IDSB3KWA1 339 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 IMPA2O14732 288 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 LCATP04180 440 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 EVI2BP34910 448 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 CYCSP99999 105 aaKnown RBP13.34□□□□□ -0.27
HDAC6-220ENST00000477528 SPAG16Q8N0X2 631 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 MFFQ9GZY8 342 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 TAS2R3Q9NYW6 316 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 A0A1W2PQF6 199 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 YKT6O15498 198 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 PLPP2O43688 288 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 UQCRC1P31930 480 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 DUSP2Q05923 314 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 OR10A2Q9H208 303 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 ZNF850A8MQ14 1090 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 ARPC3O15145 178 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 DCNP07585 359 aaKnown RBP13.34□□□□□ -0.27
HDAC6-220ENST00000477528 GABRB1P18505 474 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 SSTR2P30874 369 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 ZNF74Q16587 644 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 HYAL4Q2M3T9 481 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 PRAMEF20Q5VT98 475 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 DCXRQ7Z4W1 244 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 NKAIN3Q8N8D7 197 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 CYSLTR2Q9NS75 346 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 SLC39A1Q9NY26 324 aa13.34□□□□□ -0.27
HDAC6-220ENST00000477528 C2orf72A6NCS6 295 aa13.33□□□□□ -0.27
HDAC6-220ENST00000477528 SIGLEC6O43699 453 aa13.33□□□□□ -0.27
HDAC6-220ENST00000477528 TMEM127O75204 238 aa13.33□□□□□ -0.27
HDAC6-220ENST00000477528 EPXP11678 715 aa13.33□□□□□ -0.27
HDAC6-220ENST00000477528 THSD4Q6ZMP0 1018 aa13.33□□□□□ -0.27
HDAC6-220ENST00000477528 ESPNLQ6ZVH7 1005 aa13.33□□□□□ -0.27
HDAC6-220ENST00000477528 OR13C9Q8NGT0 318 aa13.33□□□□□ -0.27
HDAC6-220ENST00000477528 C3orf49Q96BT1 292 aa13.33□□□□□ -0.27
HDAC6-220ENST00000477528 FOXQ1Q9C009 403 aa13.33□□□□□ -0.27
HDAC6-220ENST00000477528 FAM60AQ9NP50 221 aa13.33□□□□□ -0.27
HDAC6-220ENST00000477528 TREM1Q9NP99 234 aa13.33□□□□□ -0.27
HDAC6-220ENST00000477528 LHX9Q9NQ69 397 aa13.33□□□□□ -0.27
HDAC6-220ENST00000477528 ZNF646O15015 1829 aaPredicted RBP13.33□□□□□ -0.28
HDAC6-220ENST00000477528 CELA2BP08218 269 aaPredicted RBP13.33□□□□□ -0.28
HDAC6-220ENST00000477528 INHBBP09529 407 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 IFNGR1P15260 489 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 HTR2AP28223 471 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 KIR2DL3P43628 341 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 LIMS1P48059 325 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 ZNF141Q15928 474 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 LAIR2Q6ISS4 152 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 CREB3L2Q70SY1 520 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 KDM8Q8N371 416 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 SLCO5A1Q9H2Y9 848 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 P2RY10O00398 339 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 TBXA2RP21731 343 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 PPP1CAP62136 330 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 GLYATL3Q5SZD4 288 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 ABHD17BQ5VST6 288 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 TIGD3Q6B0B8 471 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 TSSK4Q6SA08 328 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 OR52I2Q8NH67 350 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 RHBDD1Q8TEB9 315 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 ST8SIA1Q92185 356 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 ZBTB8AQ96BR9 441 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 MGAMO43451 1857 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 PTGS2P35354 604 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 MALLQ13021 153 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 SLC25A35Q3KQZ1 300 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 C3P1Q6ZMU1 363 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 CD163Q86VB7 1156 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 PLPP7Q8NBV4 271 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 SARGQ9BW04 601 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 ULBP2Q9BZM5 246 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 S1PR5Q9H228 398 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 MYOFQ9NZM1 2061 aa13.33□□□□□ -0.28
HDAC6-220ENST00000477528 TMEM82A0PJX8 343 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 PRSS37A4D1T9 235 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 GK2Q14410 553 aaPredicted RBP13.32□□□□□ -0.28
HDAC6-220ENST00000477528 GLYR1Q49A26 553 aaPredicted RBP13.32□□□□□ -0.28
HDAC6-220ENST00000477528 SLC22A6Q4U2R8 563 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 FAM57BQ71RH2 274 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms