RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 ZFAND4Q86XD8 727 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 TMEM126BQ8IUX1 230 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 FAM9CQ8IZT9 166 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 CSNK1A1LQ8N752 337 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 FNDC5Q8NAU1 212 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 CCDC197Q8NCU1 140 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 ZNF740Q8NDX6 193 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 OR2L5Q8NG80 312 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 OR4C15Q8NGM1 316 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 OR10G7Q8NGN6 311 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 CDC26Q8NHZ8 85 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 WDR36Q8NI36 951 aaKnown RBP3.21□□□□□ -1.9
UBR3-209ENST00000477461 C11orf45Q8TAV5 145 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 NT5CQ8TCD5 201 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 TSSK2Q96PF2 358 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 ZNF317Q96PQ6 595 aaPredicted RBP3.21□□□□□ -1.9
UBR3-209ENST00000477461 OR2A5Q96R48 311 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 CCT8L2Q96SF2 557 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 INTS14Q96SY0 518 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 HBEGFQ99075 208 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 CITED2Q99967 270 aaPredicted RBP3.21□□□□□ -1.9
UBR3-209ENST00000477461 TBCDQ9BTW9 1192 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 CCDC28BQ9BUN5 200 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 MS4A8Q9BY19 250 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 C20orf27Q9GZN8 174 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 CHRNA10Q9GZZ6 450 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 PARLQ9H300 379 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 RHBGQ9H310 441 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 OR51B5Q9H339 312 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 MEAF6Q9HAF1 191 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 LRTM1Q9HBL6 345 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 ANKHQ9HCJ1 492 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 FAM60AQ9NP50 221 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 FARSBQ9NSD9 589 aaKnown RBP3.21□□□□□ -1.9
UBR3-209ENST00000477461 C1orf109Q9NX04 203 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 SLC39A1Q9NY26 324 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 SLCO1C1Q9NYB5 712 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 VPS29Q9UBQ0 182 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 PISDQ9UG56 409 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 ZNF225Q9UK10 706 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 PILRAQ9UKJ1 303 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 EIF3LQ9Y262 564 aaKnown RBP3.21□□□□□ -1.9
UBR3-209ENST00000477461 POLR3HQ9Y535 204 aaPredicted RBP3.21□□□□□ -1.9
UBR3-209ENST00000477461 DNAJC15Q9Y5T4 150 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 SPACA6W5XKT8 324 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 RIF1Q5UIP0 2472 aaKnown RBP3.21□□□□□ -1.9
UBR3-209ENST00000477461 FER1L5A0AVI2 2057 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 SCN2AQ99250 2005 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 PRUNE2Q8WUY3 3088 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 A0A087WZ39 114 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 A0A0G2JN53 185 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 IQCMA0A1B0GVH7 501 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 LRIT2A6NDA9 550 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 PRSS46E5RG02 174 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 E9PBE3 544 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 PSMD12O00232 456 aaPredicted RBP3.2□□□□□ -1.9
UBR3-209ENST00000477461 SAP18O00422 153 aaKnown RBP3.2□□□□□ -1.9
UBR3-209ENST00000477461 RTCAO00442 366 aaKnown RBP3.2□□□□□ -1.9
UBR3-209ENST00000477461 SDHDO14521 159 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 TFECO14948 347 aaPredicted RBP3.2□□□□□ -1.9
UBR3-209ENST00000477461 UBDO15205 165 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 P2RX6O15547 441 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 ZNF749O43361 778 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 TLX2O43763 284 aaPredicted RBP3.2□□□□□ -1.9
UBR3-209ENST00000477461 KLHL41O60662 606 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 CCDC22O60826 627 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 SHOX2O60902 331 aaPredicted RBP3.2□□□□□ -1.9
UBR3-209ENST00000477461 SCRG1O75711 98 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 DCTN3O75935 186 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 FAM107AO95990 144 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 HPRP00739 348 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 KLK3P07288 261 aaPredicted RBP3.2□□□□□ -1.9
UBR3-209ENST00000477461 ANXA4P09525 319 aaPredicted RBP3.2□□□□□ -1.9
UBR3-209ENST00000477461 PRPS2P11908 318 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 FOLR1P15328 257 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 IL1RNP18510 177 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 HPCAL1P37235 193 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 ASMTP46597 345 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 GABRA4P48169 554 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 ARFIP1P53367 373 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 PLA2G16P53816 162 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 MTTPP55157 894 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 CLDN6P56747 220 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 RAB8AP61006 207 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 ERVK-8P63133 956 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 BTN3A2P78410 334 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 HMGCS1Q01581 520 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 EMX2Q04743 252 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 SCARB2Q14108 478 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 C16orf72Q14CZ0 275 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 PPA1Q15181 289 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 SMU1Q2TAY7 513 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 HKDC1Q2TB90 917 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 FAM106AQ4KMX7 169 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 DEFB134Q4QY38 66 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 XKR7Q5GH72 579 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 DCAF12Q5T6F0 453 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 IL23RQ5VWK5 629 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 OR4C11Q6IEV9 310 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 ADNP2Q6IQ32 1131 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms