RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 M0R3G1 203 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 ABCD4O14678 606 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 ARHGEF9O43307 516 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 DHHO43323 396 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 DEAF1O75398 565 aaPredicted RBP10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 GADD45GO95257 159 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 FARS2O95363 451 aaKnown RBP10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 CST1P01037 141 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 CD14P08571 375 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 DANCRP0C864 163 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 MAKP20794 623 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 RRM2P31350 389 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 OMPP47874 163 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 ZNF84P51523 738 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 ART1P52961 327 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 RPL27P61353 136 aaKnown RBP10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 FHL1Q13642 323 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 ETFDHQ16134 617 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 ZBED5Q49AG3 693 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 HIKESHIQ53FT3 197 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 THEM4Q5T1C6 240 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 SHEQ5VZ18 495 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 GPR139Q6DWJ6 353 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 LRFN4Q6PJG9 635 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 DTX2Q86UW9 622 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 LRRC75AQ8NAA5 344 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 NOXO1Q8NFA2 376 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 OR4F15Q8NGB8 312 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 OR4K5Q8NGD3 323 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 TMEM171Q8WVE6 324 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 AKAP1Q92667 903 aaKnown RBP eCLIP10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 NRGNQ92686 78 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 NMD3Q96D46 503 aaKnown RBP10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 SLC38A2Q96QD8 506 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 KCNK17Q96T54 332 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 FOXB1Q99853 325 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 C1orf198Q9H425 327 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 CXorf56Q9H5V9 222 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 UBTD1Q9HAC8 227 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 B3GNT2Q9NY97 397 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 RHCGQ9UBD6 479 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 DNAJB9Q9UBS3 223 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 LYVE1Q9Y5Y7 322 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 RAI1Q7Z5J4 1906 aaPredicted RBP10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 ARRDC5A6NEK1 342 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 H3BNX3 289 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 OVOL3O00110 214 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 SMPD2O60906 423 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 PTP4A3O75365 173 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 DIRAS1O95057 198 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 UBL3O95164 117 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 NDUFB2O95178 105 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 CRYAAP02489 173 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 BMP4P12644 408 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 NPR2P20594 1047 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 PTNP21246 168 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 FPR3P25089 353 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 FASP25445 335 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 ZNF83P51522 516 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 CLRN1P58418 232 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 MRPS34P82930 218 aaKnown RBP10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 SPIBQ01892 262 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 LGALS3BPQ08380 585 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 LAPTM4AQ15012 233 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 ATP6AP1Q15904 470 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 FGD3Q5JSP0 725 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 PHYHD1Q5SRE7 291 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 C9orf135Q5VTT2 229 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 ZNF813Q6ZN06 617 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 ARIH2OSQ8N7S6 290 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 OR4C15Q8NGM1 316 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 MOSPD2Q8NHP6 518 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 SMAP2Q8WU79 429 aaPredicted RBP10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 NRBF2Q96F24 287 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 RBP7Q96R05 134 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 DHRS9Q9BPW9 319 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 REEP1Q9H902 201 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 S100A14Q9HCY8 104 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 TMEM38BQ9NVV0 291 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 CISD1Q9NZ45 108 aaKnown RBP10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 TMCC3Q9ULS5 477 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 SIGLEC7Q9Y286 467 aa10.78□□□□□ -0.68
CLCNKA-205ENST00000477360 ALPK2Q86TB3 2170 aa10.77□□□□□ -0.68
CLCNKA-205ENST00000477360 CADP27708 2225 aa10.77□□□□□ -0.68
CLCNKA-205ENST00000477360 IGHV1-18A0A0C4DH31 117 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 TRBV4-1A0A0J9YWV2 114 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 CDC42EP2O14613 210 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 IMPA2O14732 288 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 PIP5K1CO60331 668 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 TRMUO75648 421 aaKnown RBP10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 TIPRLO75663 272 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 PLAUP00749 431 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 F13BP05160 661 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 QDPRP09417 244 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 OR8G3PP0DMU2 310 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 CDH2P19022 906 aaPredicted RBP10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 FUT4P22083 530 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 ERFP50548 548 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 CDH11P55287 796 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 CTXN1P60606 82 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms