RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 SC5DO75845 299 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 CDK2AP2O75956 126 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 SOX30O94993 753 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 PLEKHA8P1O95397 391 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 PSMG1O95456 288 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 RAB3DO95716 219 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 CA1P00915 261 aaPredicted RBP2.5□□□□□ -2.01
HMGN4-202ENST00000477243 KLK1P06870 262 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 NGFRP08138 427 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 GOLGA8HP0CJ92 632 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 HKR1P10072 659 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 PSKH1P11801 424 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 XRCC1P18887 633 aaPredicted RBP2.5□□□□□ -2.01
HMGN4-202ENST00000477243 RAB4AP20338 218 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 EFNA1P20827 205 aaPredicted RBP2.5□□□□□ -2.01
HMGN4-202ENST00000477243 HSD11B1P28845 292 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 MAGEA6P43360 314 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 KIR3DL2P43630 455 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 BRCC3P46736 316 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 GNPDA1P46926 289 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 RGRP47804 291 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 CLDN6P56747 220 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 TAS2R60P59551 318 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 OR2B8PP59922 312 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 ACTBP60709 375 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 ACTA2P62736 377 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 ACTG1P63261 375 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 ACTG2P63267 376 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 ACTC1P68032 377 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 ACTA1P68133 377 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 ST3GAL3Q11203 375 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 RAB40BQ12829 278 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 ILF3Q12906 894 aaKnown RBP eCLIP2.5□□□□□ -2.01
HMGN4-202ENST00000477243 RIGQ13278 110 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 MADCAM1Q13477 382 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 GTF2H2Q13888 395 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 SERTAD2Q14140 314 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 PSG5Q15238 335 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 RAB35Q15286 201 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 NDUFA9Q16795 377 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 ATP6V1FQ16864 119 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 C5orf64Q2M2E5 130 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 SPATS1Q496A3 300 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 FNBP1LQ5T0N5 605 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 SDHAF4Q5VUM1 108 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 GTF2H2CQ6P1K8 395 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 ZNF730Q6ZMV8 503 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 Q6ZSN1 163 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 SLC25A48Q6ZT89 311 aaKnown RBP2.5□□□□□ -2.01
HMGN4-202ENST00000477243 CYS1Q717R9 158 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 COX15Q7KZN9 410 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 C16orf82Q7Z2V1 217 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 TSEN54Q7Z6J9 526 aaKnown RBP2.5□□□□□ -2.01
HMGN4-202ENST00000477243 CMC1Q7Z7K0 106 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 FUNDC1Q8IVP5 155 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 MCOLN2Q8IZK6 566 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 TRAM1L1Q8N609 369 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 TPRX1Q8N7U7 411 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 TCEANCQ8N8B7 351 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 MAPKAPK5-AS1Q8N8E1 139 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 CDRT4Q8N9R6 151 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 LMNTD1Q8N9Z9 388 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 PNLDC1Q8NA58 520 aaKnown RBP2.5□□□□□ -2.01
HMGN4-202ENST00000477243 ZNF680Q8NEM1 530 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 ITFG1Q8TB96 612 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 IFT81Q8WYA0 676 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 ABTB1Q969K4 478 aaPredicted RBP2.5□□□□□ -2.01
HMGN4-202ENST00000477243 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.5□□□□□ -2.01
HMGN4-202ENST00000477243 RAD51AP1Q96B01 352 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 MICU1Q9BPX6 476 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 PSD2Q9BQI7 771 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 SLC35A5Q9BS91 424 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 NICN1Q9BSH3 213 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 COPS4Q9BT78 406 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 PARD6GQ9BYG4 376 aaPredicted RBP2.5□□□□□ -2.01
HMGN4-202ENST00000477243 PITPNM3Q9BZ71 974 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 IRX2Q9BZI1 471 aaPredicted RBP2.5□□□□□ -2.01
HMGN4-202ENST00000477243 ACTR3CQ9C0K3 210 aaPredicted RBP2.5□□□□□ -2.01
HMGN4-202ENST00000477243 FKRPQ9H9S5 495 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 PATZ1Q9HBE1 687 aaKnown RBP2.5□□□□□ -2.01
HMGN4-202ENST00000477243 C3orf14Q9HBI5 128 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 APOBEC3GQ9HC16 384 aaKnown RBP2.5□□□□□ -2.01
HMGN4-202ENST00000477243 C6orf50Q9HD87 102 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 A4GALTQ9NPC4 353 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 TMEM30AQ9NV96 361 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 TAS2R9Q9NYW1 312 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 SIGLEC8Q9NYZ4 499 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 VAPAQ9P0L0 249 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 CIDEBQ9UHD4 219 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 CLEC4EQ9ULY5 219 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 UBQLN1Q9UMX0 589 aaKnown RBP2.5□□□□□ -2.01
HMGN4-202ENST00000477243 SLC22A13Q9Y226 551 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 MRPS28Q9Y2Q9 187 aaKnown RBP2.5□□□□□ -2.01
HMGN4-202ENST00000477243 YARS2Q9Y2Z4 477 aaKnown RBP2.5□□□□□ -2.01
HMGN4-202ENST00000477243 SELENOKQ9Y6D0 94 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 PPLO60437 1756 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 AHCTF1Q8WYP5 2266 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 TENM2Q9NT68 2774 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 HIVEP1P15822 2718 aa2.5□□□□□ -2.01
HMGN4-202ENST00000477243 CD163L1Q9NR16 1453 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms