RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 PIK3R3Q92569 461 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 GLYATL1Q969I3 302 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 TM4SF18Q96CE8 201 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 SMIM12Q96EX1 92 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 PPP1R16AQ96I34 528 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 PPP3R2Q96LZ3 170 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 KLHL15Q96M94 604 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 GLT1D1Q96MS3 346 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 TNFRSF13CQ96RJ3 184 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 HBEGFQ99075 208 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 STACQ99469 402 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 SERPINI1Q99574 410 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 LRRC61Q9BV99 259 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 RAB11FIP5Q9BXF6 653 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 MROQ9BYG7 248 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 NMNAT2Q9BZQ4 307 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 CCDC90BQ9GZT6 254 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 HRH4Q9H3N8 390 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 ACTL8Q9H568 366 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 TMEM231Q9H6L2 316 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 ARMC7Q9H6L4 198 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 SMYD3Q9H7B4 428 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 NT5DC2Q9H857 520 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 WDR41Q9HAD4 459 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 SLC28A3Q9HAS3 691 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 EQTNQ9NQ60 294 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 BIN3Q9NQY0 253 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 PXMP2Q9NR77 195 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 CUTCQ9NTM9 273 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 PLEKHJ1Q9NW61 149 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 C1orf109Q9NX04 203 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 TMEM161AQ9NX61 479 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 SLC2A8Q9NY64 477 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 B3GNT2Q9NY97 397 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 SPHK1Q9NYA1 384 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 GPR83Q9NYM4 423 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 RDH8Q9NYR8 311 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 GLTPQ9NZD2 209 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 MAT2BQ9NZL9 334 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 DKKL1Q9UK85 242 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 NXT1Q9UKK6 140 aaKnown RBP2.14□□□□□ -2.07
XRN1-211ENST00000477237 A4GNTQ9UNA3 340 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 RPL26L1Q9UNX3 145 aaKnown RBP2.14□□□□□ -2.07
XRN1-211ENST00000477237 FLVCR2Q9UPI3 526 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 FOXA2Q9Y261 457 aaPredicted RBP2.14□□□□□ -2.07
XRN1-211ENST00000477237 CSDC2Q9Y534 153 aaKnown RBP2.14□□□□□ -2.07
XRN1-211ENST00000477237 DAPK1P53355 1430 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 FGD6Q6ZV73 1430 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 KIF1BO60333 1816 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 USP42Q9H9J4 1324 aaKnown RBP2.14□□□□□ -2.07
XRN1-211ENST00000477237 NRXN1Q9ULB1 1477 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 SHANK2Q9UPX8 1470 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 ABCC12Q96J65 1359 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 KDM5AP29375 1690 aaKnown RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 CHD5Q8TDI0 1954 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 HYKKA2RU49 373 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 PRSS37A4D1T9 235 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 SAGE2PA6NJ88 616 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 FAM90A26D6RGX4 464 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 CLDN34H7C241 214 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 EEF2KO00418 725 aaKnown RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 IMPA2O14732 288 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 CDIPTO14735 213 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 NBR2O15453 112 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 RGS5O15539 181 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 CHST10O43529 356 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 PLIN3O60664 434 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 UGT2B11O75310 529 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 ENTPD5O75356 428 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 BANF1O75531 89 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 EIF3GO75821 320 aaKnown RBP eCLIP2.13□□□□□ -2.07
XRN1-211ENST00000477237 SCO1O75880 301 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 TM7SF2O76062 418 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 PSMG1O95456 288 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 BCL10O95999 233 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 CYB5R3P00387 301 aaPredicted RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 IGF2P01344 180 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 IFNA21P01568 189 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 CD5P06127 495 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 ACSM4P0C7M7 580 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 HAPLN1P10915 354 aaPredicted RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 ANXA3P12429 323 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 GTF2F2P13984 249 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 MMP9P14780 707 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 GABRA1P14867 456 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 B4GALT1P15291 398 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 FOLR1P15328 257 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 HLA-GP17693 338 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 PGAM1P18669 254 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 CSNK2A2P19784 350 aaPredicted RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 NPR2P20594 1047 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 GZMHP20718 246 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 ATP6V1B2P21281 511 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 TBXA2RP21731 343 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 PAICSP22234 425 aaKnown RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 UQCRC2P22695 453 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 PSMB4P28070 264 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 CALCRP30988 508 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 SLC6A6P31641 620 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms