RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 CSNK1A1P48729 337 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 ZNF81P51508 661 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 UFM1P61960 85 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 SLC3A1Q07837 685 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 PUDPQ08623 228 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 HNRNPA0Q13151 305 aaKnown RBP9.6□□□□□ -0.87
BRCA1-213ENST00000476777 PMS2P3Q13401 168 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 C9orf139Q6ZV77 190 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 SPATC1Q76KD6 591 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 RHOUQ7L0Q8 258 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 PXKQ7Z7A4 578 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 ZNF781Q8N8C0 355 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 LSMEM1Q8N8F7 131 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 ICA1LQ8NDH6 482 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 OR6S1Q8NH40 331 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 UBLCP1Q8WVY7 318 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-213ENST00000476777 TMEM19Q96HH6 336 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 OR52E6Q96RD3 313 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 SH3GL3Q99963 347 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 CITED1Q99966 193 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 RSPO3Q9BXY4 272 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-213ENST00000476777 BCL2L14Q9BZR8 327 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 NPHS2Q9NP85 383 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 TMEM38BQ9NVV0 291 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 RPS6KB2Q9UBS0 482 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 IFT52Q9Y366 437 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 INSIG2Q9Y5U4 225 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 SOX21Q9Y651 276 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-213ENST00000476777 TANC2Q9HCD6 1990 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 TENM3Q9P273 2699 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 A0A1B0GUS0 222 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 PLPP3O14495 311 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 LCE2BO14633 110 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 TM9SF1O15321 606 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 SPRY3O43610 288 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 KNG1P01042 644 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 BGLAPP02818 100 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 IGHV4-38-2P0DP08 117 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 LBPP18428 481 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 DRD4P21917 467 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 CRATP43155 626 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 MMP15P51511 669 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 DSTNP60981 165 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 LRRC74AQ0VAA2 488 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 TBC1D28Q2M2D7 210 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 SPRNQ5BIV9 151 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 TMEM255AQ5JRV8 349 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 LRFN4Q6PJG9 635 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 C17orf107Q6ZR85 190 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 KIR3DL3Q8N743 410 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 BHLHE22Q8NFJ8 381 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-213ENST00000476777 DNAJA4Q8WW22 397 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-213ENST00000476777 TMEM54Q969K7 222 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 MOGAT1Q96PD6 335 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 CCT8L2Q96SF2 557 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 MRI1Q9BV20 369 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 ASPNQ9BXN1 380 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 MS4A7Q9GZW8 240 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-213ENST00000476777 C1orf198Q9H425 327 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 CACYBPQ9HB71 228 aaKnown RBP9.59□□□□□ -0.87
BRCA1-213ENST00000476777 DCAF16Q9NXF7 216 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 MRPL39Q9NYK5 338 aaKnown RBP9.59□□□□□ -0.87
BRCA1-213ENST00000476777 GLTPQ9NZD2 209 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 TESQ9UGI8 421 aaKnown RBP9.59□□□□□ -0.87
BRCA1-213ENST00000476777 GPR45Q9Y5Y3 372 aa9.59□□□□□ -0.87
BRCA1-213ENST00000476777 ZSCAN5BA6NJL1 495 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 M0QZ24 198 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 RFXANKO14593 260 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 ENTPD5O75356 428 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 SERPINI2O75830 405 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 GPANK1O95872 356 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 IGHV2-70P01814 119 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 ADH4P08319 380 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 ALDOCP09972 364 aaKnown RBP9.58□□□□□ -0.88
BRCA1-213ENST00000476777 MYZAPP0CAP1 466 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 AHCYP23526 432 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 ETV4P43268 484 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 MTNR1AP48039 350 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 SLC6A9P48067 706 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 BIDP55957 195 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 SEC61A1P61619 476 aaKnown RBP9.58□□□□□ -0.88
BRCA1-213ENST00000476777 PAX8Q06710 450 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 PDCD4Q53EL6 469 aaKnown RBP9.58□□□□□ -0.88
BRCA1-213ENST00000476777 ALG10BQ5I7T1 473 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 OGFOD2Q6N063 350 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 TMEM53Q6P2H8 277 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 DPPA2Q7Z7J5 298 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 COMTD1Q86VU5 262 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 JAZF1Q86VZ6 243 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 CPEB3Q8NE35 698 aaKnown RBP9.58□□□□□ -0.88
BRCA1-213ENST00000476777 OR52E2Q8NGJ4 325 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 OR1J2Q8NGS2 313 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 EPYCQ99645 322 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 RHOXF2Q9BQY4 288 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 C20orf27Q9GZN8 174 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 RNF121Q9H920 327 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 TPT1P8Q9HAU6 139 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 BEX1Q9HBH7 125 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 AIG1Q9NVV5 245 aa9.58□□□□□ -0.88
BRCA1-213ENST00000476777 NPTNQ9Y639 398 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms