RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 CD3EP07766 207 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 CELA3BP08861 270 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 QDPRP09417 244 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 RAP2AP10114 183 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 B4GALT1P15291 398 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 ACVR1BP36896 505 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 IST1P53990 364 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 NR1H2P55055 460 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 CLRN1P58418 232 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 SMIM11AP58511 58 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 PRPS1P60891 318 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 RPL27P61353 136 aaKnown RBP8.46□□□□□ -1.06
HDAC3-208ENST00000476739 LCN6P62502 163 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 FLOT2Q14254 428 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 FAM98BQ52LJ0 330 aaKnown RBP8.46□□□□□ -1.06
HDAC3-208ENST00000476739 C1QTNF12Q5T7M4 302 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 ZNF770Q6IQ21 691 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-208ENST00000476739 ADAM5Q6NVV9 412 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 C1orf94Q6P1W5 598 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 KLHL24Q6TFL4 600 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 PAMR1Q6UXH9 720 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 MYPOPQ86VE0 399 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-208ENST00000476739 AQP12AQ8IXF9 295 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 FGFBP3Q8TAT2 258 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 ZNF519Q8TB69 540 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 SLCO4A1Q96BD0 722 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 NMD3Q96D46 503 aaKnown RBP8.46□□□□□ -1.06
HDAC3-208ENST00000476739 KCNK17Q96T54 332 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 KATNB1Q9BVA0 655 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 CHID1Q9BWS9 393 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 LRMDAQ9H2I8 198 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 ESRP2Q9H6T0 727 aaKnown RBP8.46□□□□□ -1.06
HDAC3-208ENST00000476739 ZNF224Q9NZL3 707 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 BLOC1S6Q9UL45 172 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 TMEM5Q9Y2B1 443 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 RNF115Q9Y4L5 304 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 LRRC42Q9Y546 428 aa8.46□□□□□ -1.06
HDAC3-208ENST00000476739 IGHV1-18A0A0C4DH31 117 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 DHRS12A0PJE2 317 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 NPIPB13A6NJU9 1138 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 NPIPB4C9JG80 1138 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 DHHO43323 396 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 KRT36O76013 467 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 GASTP01350 101 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 HLA-HP01893 362 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 CD14P08571 375 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 PATE4P0C8F1 98 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 CD53P19397 219 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 CD40P25942 277 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 HOXC12P31275 282 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 RPL4P36578 427 aaKnown RBP8.45□□□□□ -1.06
HDAC3-208ENST00000476739 DAP3P51398 398 aaKnown RBP8.45□□□□□ -1.06
HDAC3-208ENST00000476739 UBE2NP61088 152 aaKnown RBP8.45□□□□□ -1.06
HDAC3-208ENST00000476739 DBPQ10586 325 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-208ENST00000476739 ANKDD1AQ495B1 522 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 MESTQ5EB52 335 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 OR2T5Q6IEZ7 315 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 B3GLCTQ6Y288 498 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 ZNF813Q6ZN06 617 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 ASRGL1Q7L266 308 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 ZNF627Q7L945 461 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 FAM122BQ7Z309 247 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 TMEM179BQ7Z7N9 219 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 MDP1Q86V88 176 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 SPATA24Q86W54 205 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 OR2T29Q8NH02 315 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 MAGEE2Q8TD90 523 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-208ENST00000476739 AKAP1Q92667 903 aaKnown RBP eCLIP8.45□□□□□ -1.06
HDAC3-208ENST00000476739 UTP4Q969X6 686 aaKnown RBP8.45□□□□□ -1.06
HDAC3-208ENST00000476739 RASD2Q96D21 266 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 Q96M85 177 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 FOXB1Q99853 325 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 TRIM15Q9C019 465 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 YIPF3Q9GZM5 350 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 NGBQ9NPG2 151 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 B3GAT2Q9NPZ5 323 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 NRIP3Q9NQ35 241 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 TMCC3Q9ULS5 477 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 POFUT2Q9Y2G5 429 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 DSCAMO60469 2012 aa8.45□□□□□ -1.06
HDAC3-208ENST00000476739 HEATR1Q9H583 2144 aaKnown RBP8.45□□□□□ -1.06
HDAC3-208ENST00000476739 AKAP9Q99996 3911 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 TEX13CA0A0J9YWL9 993 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 ARHGEF9O43307 516 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 FKBP6O75344 327 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 CCNB2O95067 398 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 NDUFB2O95178 105 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 STAMBPO95630 424 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 WNT11O96014 354 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 CST1P01037 141 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 IGKV3-15P01624 115 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 RAF1P04049 648 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 IGFBP1P08833 259 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-208ENST00000476739 CECR9P0C854 216 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 FPR3P25089 353 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 PTAFRP25105 342 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 CDAP32320 146 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 RANBP1P43487 201 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 CAPZA2P47755 286 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 GSSP48637 474 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms