RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 GDNFP39905 211 aa14.87□□□□□ -0.03
TMEM53-208ENST00000476724 POLR2HP52434 150 aaKnown RBP14.87□□□□□ -0.03
TMEM53-208ENST00000476724 RASGEF1BQ0VAM2 473 aa14.87□□□□□ -0.03
TMEM53-208ENST00000476724 TCEAL6Q6IPX3 200 aa14.87□□□□□ -0.03
TMEM53-208ENST00000476724 ESPNLQ6ZVH7 1005 aa14.87□□□□□ -0.03
TMEM53-208ENST00000476724 FCRLAQ7L513 359 aa14.87□□□□□ -0.03
TMEM53-208ENST00000476724 OR56B4Q8NH76 319 aa14.87□□□□□ -0.03
TMEM53-208ENST00000476724 CEP76Q8TAP6 659 aa14.87□□□□□ -0.03
TMEM53-208ENST00000476724 ZNF417Q8TAU3 575 aa14.87□□□□□ -0.03
TMEM53-208ENST00000476724 METTL21AQ8WXB1 218 aa14.87□□□□□ -0.03
TMEM53-208ENST00000476724 TCEAL3Q969E4 200 aa14.87□□□□□ -0.03
TMEM53-208ENST00000476724 NRSN2Q9GZP1 204 aa14.87□□□□□ -0.03
TMEM53-208ENST00000476724 SLC25A18Q9H1K4 315 aa14.87□□□□□ -0.03
TMEM53-208ENST00000476724 TSPAN10Q9H1Z9 355 aaPredicted RBP14.87□□□□□ -0.03
TMEM53-208ENST00000476724 SYT4Q9H2B2 425 aa14.87□□□□□ -0.03
TMEM53-208ENST00000476724 OR51J1Q9H342 316 aa14.87□□□□□ -0.03
TMEM53-208ENST00000476724 PTTG3PQ9NZH4 202 aa14.87□□□□□ -0.03
TMEM53-208ENST00000476724 EMC3Q9P0I2 261 aa14.87□□□□□ -0.03
TMEM53-208ENST00000476724 CDC14CA4D256 554 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 TVP23AA6NH52 213 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 YKT6O15498 198 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 ZNF254O75437 659 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 H2AFB2P0C5Z0 115 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 ABCD3P28288 659 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 MNDAP41218 407 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 EFNA3P52797 238 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 FCN2Q15485 313 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 TOMM34Q15785 309 aaPredicted RBP14.86□□□□□ -0.03
TMEM53-208ENST00000476724 C1orf189Q5VU69 101 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 FDX2Q6P4F2 183 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 LINGO2Q7L985 606 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 PRSS45Q7RTY3 260 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 ZNF441Q8N8Z8 693 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 OR2G2Q8NGZ5 317 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 ASB17Q8WXJ9 295 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 NSMAFQ92636 917 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 SLC25A38Q96DW6 304 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 RANBP3Q9H6Z4 567 aaPredicted RBP14.86□□□□□ -0.03
TMEM53-208ENST00000476724 KLHL9Q9P2J3 617 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 ASCC3Q8N3C0 2202 aaKnown RBP14.86□□□□□ -0.03
TMEM53-208ENST00000476724 IGHV5-10-1A0A0J9YXX1 117 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 OR4C45A6NMZ5 311 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 A8MVM7 634 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 H7C1C5 153 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 AKR7A3O95154 331 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 LDOC1O95751 146 aaPredicted RBP14.86□□□□□ -0.03
TMEM53-208ENST00000476724 CER1O95813 267 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 ART1P52961 327 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 RPL27P61353 136 aaKnown RBP14.86□□□□□ -0.03
TMEM53-208ENST00000476724 LCN6P62502 163 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 SQSTM1Q13501 440 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 RNASE12Q5GAN4 147 aaKnown RBP14.86□□□□□ -0.03
TMEM53-208ENST00000476724 FAM205BPQ63HN1 556 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 PWWP2BQ6NUJ5 590 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 DPY19L4Q7Z388 723 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 OTOSQ8NHW6 89 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 IFI44Q8TCB0 444 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 GPR148Q8TDV2 347 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 THEM6Q8WUY1 208 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 FCAMRQ8WWV6 532 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 ORAI1Q96D31 301 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 HAVCR1Q96D42 359 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 DCBLD2Q96PD2 775 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 KLHDC3Q9BQ90 382 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 VN1R1Q9GZP7 353 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 MKL2Q9ULH7 1088 aa14.86□□□□□ -0.03
TMEM53-208ENST00000476724 TMED7-TICAM2A0A0A6YYA0 188 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 FADS1O60427 444 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 NPIPB7O75200 414 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 CCR9P51686 369 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 CREB3L2Q70SY1 520 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 GRINAQ7Z429 371 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 MISPQ8IVT2 679 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 PM20D2Q8IYS1 436 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 ZNF676Q8N7Q3 588 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 SYNPRQ8TBG9 265 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 STK35Q8TDR2 534 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 DEDD2Q8WXF8 326 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 MIB2Q96AX9 1013 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 PTDSS2Q9BVG9 487 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 OR5V1Q9UGF6 321 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 TMED7Q9Y3B3 224 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 TRBV5-7A0A0A0MS05 114 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 OR2T1O43869 369 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 SUSD5O60279 629 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 ZNF780AO75290 641 aaPredicted RBP14.85□□□□□ -0.03
TMEM53-208ENST00000476724 KRT33AO76009 404 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 DXOO77932 396 aaKnown RBP14.85□□□□□ -0.03
TMEM53-208ENST00000476724 ANXA3P12429 323 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 GSG1Q2KHT4 349 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 BTBD16Q32M84 506 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 FGD2Q7Z6J4 655 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 LRRTM1Q86UE6 522 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 DND1Q8IYX4 353 aaKnown RBP14.85□□□□□ -0.03
TMEM53-208ENST00000476724 PHF21AQ96BD5 680 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 TXNIPQ9H3M7 391 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 B9D1Q9UPM9 204 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 FOXJ3Q9UPW0 622 aa14.85□□□□□ -0.03
TMEM53-208ENST00000476724 WDFY3Q8IZQ1 3526 aa14.84□□□□□ -0.03
TMEM53-208ENST00000476724 PRSS37A4D1T9 235 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms