RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 CPSF4LA6NMK7 179 aaKnown RBP11.2□□□□□ -0.62
MRPL55-228ENST00000476267 EVPLLA8MZ36 301 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 DHHO43323 396 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 DEAF1O75398 565 aaPredicted RBP11.2□□□□□ -0.62
MRPL55-228ENST00000476267 OPN1SWP03999 348 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 OR8G3PP0DMU2 310 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 CD247P20963 164 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 CFPP27918 469 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 ZNF133P52736 654 aaPredicted RBP11.2□□□□□ -0.62
MRPL55-228ENST00000476267 ERVS71-1P61550 626 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 RBBP4Q09028 425 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 MELKQ14680 651 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 NRN1LQ496H8 165 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 AGKQ53H12 422 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 BEND6Q5SZJ8 279 aaPredicted RBP11.2□□□□□ -0.62
MRPL55-228ENST00000476267 RGS7BPQ6MZT1 257 aaPredicted RBP11.2□□□□□ -0.62
MRPL55-228ENST00000476267 RETREG3Q86VR2 466 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 DPP10Q8N608 796 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 C10orf53Q8N6V4 93 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 SLC30A7Q8NEW0 376 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 ADAMTS16Q8TE57 1224 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 ZNF566Q969W8 418 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 LRRC37BQ96QE4 947 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 SH3GL3Q99963 347 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 PRSS27Q9BQR3 290 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 MRPL13Q9BYD1 178 aaKnown RBP11.2□□□□□ -0.62
MRPL55-228ENST00000476267 METTL17Q9H7H0 456 aaPredicted RBP11.2□□□□□ -0.62
MRPL55-228ENST00000476267 TREM2Q9NZC2 230 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 DUSP13Q9UII6 198 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 ZNF229Q9UJW7 825 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 ZNF346Q9UL40 294 aaKnown RBP11.2□□□□□ -0.62
MRPL55-228ENST00000476267 TRIM33Q9UPN9 1127 aa11.2□□□□□ -0.62
MRPL55-228ENST00000476267 A0A1W2PPW3 197 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 SLC22A23A1A5C7 686 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 C17orf100A8MU93 164 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 M0QX08 132 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 CH25HO95992 272 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 AVPP01185 164 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 MMP7P09237 267 aaPredicted RBP11.19□□□□□ -0.62
MRPL55-228ENST00000476267 FAM157BP0CG42 384 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 CCL2P13500 99 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 COMPP49747 757 aaPredicted RBP11.19□□□□□ -0.62
MRPL55-228ENST00000476267 ARFIP2P53365 341 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 RUNX1T1Q06455 604 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 ALKBH6Q3KRA9 238 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 TMEM255AQ5JRV8 349 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 C11orf65Q8NCR3 313 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 OR51F2Q8NH61 342 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 STON2Q8WXE9 905 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 TAMM41Q96BW9 452 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 ZNF416Q9BWM5 594 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 SLC19A3Q9BZV2 496 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 KAT8Q9H7Z6 458 aaKnown RBP11.19□□□□□ -0.62
MRPL55-228ENST00000476267 LPAR2Q9HBW0 351 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 MEPEQ9NQ76 525 aaPredicted RBP11.19□□□□□ -0.62
MRPL55-228ENST00000476267 NANSQ9NR45 359 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 NKIRAS2Q9NYR9 191 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 TAAR3PQ9P1P4 343 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.19□□□□□ -0.62
MRPL55-228ENST00000476267 SLC13A4Q9UKG4 626 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 SLC7A7Q9UM01 511 aa11.19□□□□□ -0.62
MRPL55-228ENST00000476267 TANC2Q9HCD6 1990 aa11.18□□□□□ -0.62
MRPL55-228ENST00000476267 TRAPPC13A5PLN9 417 aa11.18□□□□□ -0.62
MRPL55-228ENST00000476267 PPIHO43447 177 aaKnown RBP11.18□□□□□ -0.62
MRPL55-228ENST00000476267 RNF13O43567 381 aa11.18□□□□□ -0.62
MRPL55-228ENST00000476267 OR6A2O95222 327 aa11.18□□□□□ -0.62
MRPL55-228ENST00000476267 PNPP00491 289 aa11.18□□□□□ -0.62
MRPL55-228ENST00000476267 QDPRP09417 244 aa11.18□□□□□ -0.62
MRPL55-228ENST00000476267 TSPAN19P0C672 248 aa11.18□□□□□ -0.62
MRPL55-228ENST00000476267 CRYBB2P43320 205 aa11.18□□□□□ -0.62
MRPL55-228ENST00000476267 GZMMP51124 257 aa11.18□□□□□ -0.62
MRPL55-228ENST00000476267 KLF3P57682 345 aaPredicted RBP11.18□□□□□ -0.62
MRPL55-228ENST00000476267 MTPNP58546 118 aa11.18□□□□□ -0.62
MRPL55-228ENST00000476267 HILS1P60008 231 aa11.18□□□□□ -0.62
MRPL55-228ENST00000476267 CCL8P80075 99 aa11.18□□□□□ -0.62
MRPL55-228ENST00000476267 MMEL1Q495T6 779 aa11.18□□□□□ -0.62
MRPL55-228ENST00000476267 AGBL2Q5U5Z8 902 aa11.18□□□□□ -0.62
MRPL55-228ENST00000476267 TTC33Q6PID6 262 aaPredicted RBP11.18□□□□□ -0.62
MRPL55-228ENST00000476267 DPPA2Q7Z7J5 298 aa11.18□□□□□ -0.62
MRPL55-228ENST00000476267 DHDDSQ86SQ9 333 aa11.18□□□□□ -0.62
MRPL55-228ENST00000476267 OR4K5Q8NGD3 323 aa11.18□□□□□ -0.62
MRPL55-228ENST00000476267 ZNF519Q8TB69 540 aa11.18□□□□□ -0.62
MRPL55-228ENST00000476267 GTF3AQ92664 365 aaKnown RBP11.18□□□□□ -0.62
MRPL55-228ENST00000476267 MCHR2Q969V1 340 aa11.18□□□□□ -0.62
MRPL55-228ENST00000476267 MPP4Q96JB8 637 aa11.18□□□□□ -0.62
MRPL55-228ENST00000476267 C1orf198Q9H425 327 aa11.18□□□□□ -0.62
MRPL55-228ENST00000476267 HINT3Q9NQE9 182 aaKnown RBP11.18□□□□□ -0.62
MRPL55-228ENST00000476267 LEF1Q9UJU2 399 aaPredicted RBP11.18□□□□□ -0.62
MRPL55-228ENST00000476267 GRIP1Q9Y3R0 1128 aa11.18□□□□□ -0.62
MRPL55-228ENST00000476267 TRAV20A0A0B4J274 112 aa11.17□□□□□ -0.62
MRPL55-228ENST00000476267 CENPBD1B2RD01 187 aa11.17□□□□□ -0.62
MRPL55-228ENST00000476267 KPNA4O00629 521 aaPredicted RBP11.17□□□□□ -0.62
MRPL55-228ENST00000476267 ENTPD5O75356 428 aa11.17□□□□□ -0.62
MRPL55-228ENST00000476267 FARS2O95363 451 aaKnown RBP11.17□□□□□ -0.62
MRPL55-228ENST00000476267 IGHV3-13P01766 116 aa11.17□□□□□ -0.62
MRPL55-228ENST00000476267 LSP1P33241 339 aa11.17□□□□□ -0.62
MRPL55-228ENST00000476267 PCGF2P35227 344 aa11.17□□□□□ -0.62
MRPL55-228ENST00000476267 UGT2B15P54855 530 aa11.17□□□□□ -0.62
MRPL55-228ENST00000476267 UCP2P55851 309 aa11.17□□□□□ -0.62
MRPL55-228ENST00000476267 MYBPC1Q00872 1141 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms