RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 LINC01553A4QN01 128 aa16.11■□□□□ 0.17
CCM2-207ENST00000475551 OR4C45A6NMZ5 311 aa16.11■□□□□ 0.17
CCM2-207ENST00000475551 LINC00587B1AMM8 73 aa16.11■□□□□ 0.17
CCM2-207ENST00000475551 CCL16O15467 120 aa16.11■□□□□ 0.17
CCM2-207ENST00000475551 CA3P07451 260 aa16.11■□□□□ 0.17
CCM2-207ENST00000475551 ACAA1P09110 424 aaPredicted RBP16.11■□□□□ 0.17
CCM2-207ENST00000475551 MAP3K8P41279 467 aa16.11■□□□□ 0.17
CCM2-207ENST00000475551 NR0B2Q15466 257 aa16.11■□□□□ 0.17
CCM2-207ENST00000475551 NDUFAF7Q7L592 441 aa16.11■□□□□ 0.17
CCM2-207ENST00000475551 GTPBP8Q8N3Z3 284 aaPredicted RBP16.11■□□□□ 0.17
CCM2-207ENST00000475551 STOML3Q8TAV4 291 aa16.11■□□□□ 0.17
CCM2-207ENST00000475551 RXFP4Q8TDU9 374 aa16.11■□□□□ 0.17
CCM2-207ENST00000475551 TMEM106AQ96A25 262 aa16.11■□□□□ 0.17
CCM2-207ENST00000475551 ADAD1Q96M93 576 aaKnown RBP16.11■□□□□ 0.17
CCM2-207ENST00000475551 SPHK1Q9NYA1 384 aa16.11■□□□□ 0.17
CCM2-207ENST00000475551 EDARQ9UNE0 448 aa16.11■□□□□ 0.17
CCM2-207ENST00000475551 TMEM72A0PK05 275 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 OR2AT4A6NND4 320 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 C1QTNF3-AMACRE9PGA6 284 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 ATP1B3P54709 279 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 SMAD2Q15796 467 aaKnown RBP16.1■□□□□ 0.17
CCM2-207ENST00000475551 C2orf76Q3KRA6 126 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 LRRC37A5PQ49AS3 106 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 LILRA6Q6PI73 481 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 VN1R4Q7Z5H5 301 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 WNT2BQ93097 391 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 RASD2Q96D21 266 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 KLHDC2Q9Y2U9 406 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 NOP16Q9Y3C1 178 aaKnown RBP16.1■□□□□ 0.17
CCM2-207ENST00000475551 PRRC2BQ5JSZ5 2229 aaKnown RBP16.1■□□□□ 0.17
CCM2-207ENST00000475551 FAM25EA8MYX2 175 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 GLAP06280 429 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 SMIM6P0DI80 62 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 TLX1P31314 330 aaPredicted RBP16.1■□□□□ 0.17
CCM2-207ENST00000475551 NPBWR1P48145 328 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 PNLIPRP2P54317 469 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 HNRNPA1L2Q32P51 320 aaKnown RBP16.1■□□□□ 0.17
CCM2-207ENST00000475551 ULK3Q6PHR2 472 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 ZAR1Q86SH2 424 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 ZNF511Q8NB15 262 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 GPR148Q8TDV2 347 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 DOK4Q8TEW6 326 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 C2CD4CQ8TF44 421 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 MCHR2Q969V1 340 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 ZBTB8AQ96BR9 441 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 COMMD4Q9H0A8 199 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 DNAJB12Q9NXW2 375 aaKnown RBP16.1■□□□□ 0.17
CCM2-207ENST00000475551 FBXO4Q9UKT5 387 aa16.1■□□□□ 0.17
CCM2-207ENST00000475551 LOC100289279A0A1B0GTE1 492 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 EDDM13A0A1B0GTR0 161 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.09■□□□□ 0.17
CCM2-207ENST00000475551 OR6C76A6NM76 312 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 TMEM212A6NML5 194 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 FAM171A2A8MVW0 826 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 GPR89AB7ZAQ6 455 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 FADS1O60427 444 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 MOSPD3O75425 235 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 AKR7A3O95154 331 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 ZNF735P0CB33 412 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 GPR89BP0CG08 455 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 ABOP16442 354 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 GABRA3P34903 492 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 CTNNB1P35222 781 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 PDZK1IP1Q13113 114 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 ELAVL3Q14576 367 aaKnown RBP16.09■□□□□ 0.17
CCM2-207ENST00000475551 ZNF234Q14588 700 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 FAM209BQ5JX69 171 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 INO80EQ8NBZ0 244 aaPredicted RBP16.09■□□□□ 0.17
CCM2-207ENST00000475551 OR5AP2Q8NGF4 316 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 OR6S1Q8NH40 331 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 FAM3DQ96BQ1 224 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 SEH1LQ96EE3 360 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 SERINC2Q96SA4 455 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 CHD7Q9P2D1 2997 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 CHD9Q3L8U1 2897 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 F8VVB4 439 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 F8VWA3 439 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 FGF18O76093 207 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 AMY2AP04746 511 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 EMDP50402 254 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 SLC25A1P53007 311 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 SNRPNP63162 240 aaKnown RBP16.09■□□□□ 0.17
CCM2-207ENST00000475551 RUNX2Q13950 521 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 ATXN7L3Q14CW9 347 aaPredicted RBP16.09■□□□□ 0.17
CCM2-207ENST00000475551 LEG1Q6P5S2 330 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 CHRDL2Q6WN34 429 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 GALNT16Q8N428 558 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 OR2G2Q8NGZ5 317 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 NT5CQ8TCD5 201 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 SEC22AQ96IW7 307 aa16.09■□□□□ 0.17
CCM2-207ENST00000475551 OR2W5A6NFC9 320 aa16.08■□□□□ 0.17
CCM2-207ENST00000475551 FABP1P07148 127 aa16.08■□□□□ 0.17
CCM2-207ENST00000475551 ITGA5P08648 1049 aa16.08■□□□□ 0.17
CCM2-207ENST00000475551 FOLR2P14207 255 aa16.08■□□□□ 0.17
CCM2-207ENST00000475551 CAPZA1P52907 286 aa16.08■□□□□ 0.17
CCM2-207ENST00000475551 SRSF3P84103 164 aaKnown RBP16.08■□□□□ 0.17
CCM2-207ENST00000475551 RAB11BQ15907 218 aa16.08■□□□□ 0.17
CCM2-207ENST00000475551 ALG11Q2TAA5 492 aa16.08■□□□□ 0.17
CCM2-207ENST00000475551 FNDC3BQ53EP0 1204 aaKnown RBP16.08■□□□□ 0.17
CCM2-207ENST00000475551 ARHGAP40Q5TG30 622 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms