RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 FBXO44Q9H4M3 255 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 REEP4Q9H6H4 257 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 PXMP2Q9NR77 195 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 GMEB1Q9Y692 573 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 MAP3K19Q56UN5 1328 aa3.94□□□□□ -1.78
SMC5-203ENST00000475540 TRBV6-6A0A0A6YYG2 114 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 KBTBD11-OT1A0A1B0GTJ5 212 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 PSMD11O00231 422 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 AIM2O14862 343 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 BCKDKO14874 412 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 HUS1O60921 280 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 FGFR1OPO95684 399 aaKnown RBP3.93□□□□□ -1.78
SMC5-203ENST00000475540 APOA1P02647 267 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 CT62P0C5K7 136 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 HSD17B2P37059 387 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 VHLP40337 213 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 RPS10P46783 165 aaKnown RBP3.93□□□□□ -1.78
SMC5-203ENST00000475540 CCNG1P51959 295 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 CLDN18P56856 261 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 ITIH4Q14624 930 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 GNMTQ14749 295 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 DUSP7Q16829 419 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 XKR4Q5GH76 650 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 MLIPQ5VWP3 458 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 C22orf42Q6IC83 251 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 FAM199XQ6PEV8 388 aaPredicted RBP3.93□□□□□ -1.78
SMC5-203ENST00000475540 CCDC137Q6PK04 289 aaKnown RBP3.93□□□□□ -1.78
SMC5-203ENST00000475540 HSDL2Q6YN16 418 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 SLC16A14Q7RTX9 510 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 TCAIMQ8N3R3 496 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 TPRX1Q8N7U7 411 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 OR5T3Q8NGG3 340 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 OR52I1Q8NGK6 324 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 OR9G4Q8NGQ1 327 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 PLPPR1Q8TBJ4 325 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 RDH5Q92781 318 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 KIFAP3Q92845 792 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 TMIGD2Q96BF3 282 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 CELF6Q96J87 481 aaKnown RBP3.93□□□□□ -1.78
SMC5-203ENST00000475540 KCNA7Q96RP8 456 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 MCHR1Q99705 422 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 RIOK1Q9BRS2 568 aaKnown RBP3.93□□□□□ -1.78
SMC5-203ENST00000475540 POLR2J2Q9GZM3 115 aaKnown RBP3.93□□□□□ -1.78
SMC5-203ENST00000475540 ROGDIQ9GZN7 287 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 POLR2J3Q9H1A7 115 aaKnown RBP3.93□□□□□ -1.78
SMC5-203ENST00000475540 STOX2Q9P2F5 926 aaPredicted RBP3.93□□□□□ -1.78
SMC5-203ENST00000475540 CLN8Q9UBY8 286 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 MROH7-TTC4A0A0A0MT08 1334 aa3.93□□□□□ -1.78
SMC5-203ENST00000475540 PLEKHH1Q9ULM0 1364 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 KCNE1BA0A087WTH5 132 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 A0A1B0GUH1 482 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 PSMB11A5LHX3 300 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 LRRIQ3A6PVS8 624 aaPredicted RBP3.92□□□□□ -1.78
SMC5-203ENST00000475540 C12orf71A8MTZ7 269 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 SERPINE3A8MV23 424 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 SULT2B1O00204 365 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 SIRPB1O00241 398 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 EIF3HO15372 352 aaKnown RBP eCLIP3.92□□□□□ -1.78
SMC5-203ENST00000475540 OXSR1O95747 527 aaPredicted RBP3.92□□□□□ -1.78
SMC5-203ENST00000475540 GNA14O95837 355 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 ABOP16442 354 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 IL12AP29459 219 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 HTR1FP30939 366 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 CX3CR1P49238 355 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 MRPL19P49406 292 aaKnown RBP3.92□□□□□ -1.78
SMC5-203ENST00000475540 PKNOX1P55347 436 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 IRF8Q02556 426 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 RAD51Q06609 339 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 EBI3Q14213 229 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 OXA1LQ15070 435 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 DGUOKQ16854 277 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 ZNF829Q3KNS6 432 aaPredicted RBP3.92□□□□□ -1.78
SMC5-203ENST00000475540 HSDL1Q3SXM5 330 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 NIPA1Q7RTP0 329 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 VRK2Q86Y07 508 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 FAM58AQ8N1B3 248 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 BLOC1S5Q8TDH9 187 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 PAQR8Q8TEZ7 354 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 PIBF1Q8WXW3 757 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 UFD1Q92890 307 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 CERS2Q96G23 380 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 CHMP4BQ9H444 224 aaKnown RBP3.92□□□□□ -1.78
SMC5-203ENST00000475540 GPATCH2LQ9NWQ4 482 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 WARS2Q9UGM6 360 aaKnown RBP3.92□□□□□ -1.78
SMC5-203ENST00000475540 NOSIPQ9Y314 301 aaKnown RBP3.92□□□□□ -1.78
SMC5-203ENST00000475540 FRMPD3Q5JV73 1810 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 NEURL4Q96JN8 1562 aa3.92□□□□□ -1.78
SMC5-203ENST00000475540 CENPJQ9HC77 1338 aaPredicted RBP3.92□□□□□ -1.78
SMC5-203ENST00000475540 A0A1B0GUS0 222 aa3.91□□□□□ -1.78
SMC5-203ENST00000475540 OR5B21A6NL26 309 aa3.91□□□□□ -1.78
SMC5-203ENST00000475540 NDUFAB1O14561 156 aa3.91□□□□□ -1.78
SMC5-203ENST00000475540 HSD17B6O14756 317 aa3.91□□□□□ -1.78
SMC5-203ENST00000475540 RAB29O14966 203 aa3.91□□□□□ -1.78
SMC5-203ENST00000475540 TOM1O60784 492 aa3.91□□□□□ -1.78
SMC5-203ENST00000475540 NPIPB7O75200 414 aa3.91□□□□□ -1.78
SMC5-203ENST00000475540 ALDOBP05062 364 aa3.91□□□□□ -1.78
SMC5-203ENST00000475540 ANXA5P08758 320 aa3.91□□□□□ -1.78
SMC5-203ENST00000475540 LEPP41159 167 aa3.91□□□□□ -1.78
SMC5-203ENST00000475540 NAA10P41227 235 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms