RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 SIGLECL1Q8N7X8 197 aa10.72□□□□□ -0.69
SKA3-206ENST00000475251 DVL3Q92997 716 aaPredicted RBP10.72□□□□□ -0.69
SKA3-206ENST00000475251 SLC25A28Q96A46 364 aa10.72□□□□□ -0.69
SKA3-206ENST00000475251 ITCHQ96J02 903 aa10.72□□□□□ -0.69
SKA3-206ENST00000475251 SPATA5L1Q9BVQ7 753 aa10.72□□□□□ -0.69
SKA3-206ENST00000475251 SLITRK2Q9H156 845 aa10.72□□□□□ -0.69
SKA3-206ENST00000475251 RNF121Q9H920 327 aa10.72□□□□□ -0.69
SKA3-206ENST00000475251 TESQ9UGI8 421 aaKnown RBP10.72□□□□□ -0.69
SKA3-206ENST00000475251 OPN4Q9UHM6 478 aa10.72□□□□□ -0.69
SKA3-206ENST00000475251 NUP50Q9UKX7 468 aa10.72□□□□□ -0.69
SKA3-206ENST00000475251 IGKV1D-42A0A075B6H8 117 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 IQCMA0A1B0GVH7 501 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 ISPDA4D126 451 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 DNAJC9-AS1A6NH13 148 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 SLC22A3O75751 556 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 OR6A2O95222 327 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 MT-ATP6P00846 226 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 IDO1P14902 403 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 UCP2P55851 309 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 LCN2P80188 198 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 PLP2Q04941 152 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 BLOC1S3Q6QNY0 202 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 WDFY1Q8IWB7 410 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 C10orf53Q8N6V4 93 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 ICA1LQ8NDH6 482 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 CCL17Q92583 94 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 LRRC58Q96CX6 371 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 TRIM44Q96DX7 344 aaPredicted RBP10.71□□□□□ -0.69
SKA3-206ENST00000475251 TXNDC15Q96J42 360 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 SORT1Q99523 831 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 EGLN1Q9GZT9 426 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 TMEM27Q9HBJ8 222 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 A4GALTQ9NPC4 353 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 TCF7L2Q9NQB0 619 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 PLEK2Q9NYT0 353 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 GLTPQ9NZD2 209 aa10.71□□□□□ -0.69
SKA3-206ENST00000475251 PKD1L1Q8TDX9 2849 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 PLSCR5A0PG75 271 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 TRPC5OSA6NMA1 111 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 TM9SF1O15321 606 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 MGRN1O60291 552 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 SERPINI2O75830 405 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 IGHV3-13P01766 116 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 BGLAPP02818 100 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 RNASE1P07998 156 aaKnown RBP10.7□□□□□ -0.7
SKA3-206ENST00000475251 PATE4P0C8F1 98 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 HTR2AP28223 471 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 GCH1P30793 250 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 LIPAP38571 399 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 ZNF81P51508 661 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 BIDP55957 195 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 BAMBIQ13145 260 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 STX3Q13277 289 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 RGNQ15493 299 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 OCLNQ16625 522 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 TSTQ16762 297 aaKnown RBP10.7□□□□□ -0.7
SKA3-206ENST00000475251 NRN1LQ496H8 165 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 C6orf10Q5SRN2 563 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 KRT73Q86Y46 540 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 BHLHE22Q8NFJ8 381 aaPredicted RBP10.7□□□□□ -0.7
SKA3-206ENST00000475251 OR5J2Q8NH18 312 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 OR6X1Q8NH79 312 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 TMEM54Q969K7 222 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 ZNF566Q969W8 418 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 TSPAN32Q96QS1 320 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 MRI1Q9BV20 369 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 C20orf27Q9GZN8 174 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 OR51B6Q9H340 312 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 EVA1AQ9H8M9 152 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 CYSLTR2Q9NS75 346 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 SLC6A13Q9NSD5 602 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 TMEM38BQ9NVV0 291 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 UBAP1Q9NZ09 502 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 CGGBP1Q9UFW8 167 aaPredicted RBP10.7□□□□□ -0.7
SKA3-206ENST00000475251 SLC13A4Q9UKG4 626 aa10.7□□□□□ -0.7
SKA3-206ENST00000475251 PRORSD1PA6NEY8 169 aa10.69□□□□□ -0.7
SKA3-206ENST00000475251 CLDN34H7C241 214 aa10.69□□□□□ -0.7
SKA3-206ENST00000475251 PLPP3O14495 311 aa10.69□□□□□ -0.7
SKA3-206ENST00000475251 SDHDO14521 159 aa10.69□□□□□ -0.7
SKA3-206ENST00000475251 MFN2O95140 757 aa10.69□□□□□ -0.7
SKA3-206ENST00000475251 ADORA3P0DMS8 318 aa10.69□□□□□ -0.7
SKA3-206ENST00000475251 BMP2P12643 396 aa10.69□□□□□ -0.7
SKA3-206ENST00000475251 APLNRP35414 380 aa10.69□□□□□ -0.7
SKA3-206ENST00000475251 TUSC1Q2TAM9 212 aa10.69□□□□□ -0.7
SKA3-206ENST00000475251 ZMAT1Q5H9K5 638 aa10.69□□□□□ -0.7
SKA3-206ENST00000475251 DHRS4L2Q6PKH6 230 aa10.69□□□□□ -0.7
SKA3-206ENST00000475251 NHLRC1Q6VVB1 395 aa10.69□□□□□ -0.7
SKA3-206ENST00000475251 SLC16A14Q7RTX9 510 aa10.69□□□□□ -0.7
SKA3-206ENST00000475251 RANBP3LQ86VV4 465 aaPredicted RBP10.69□□□□□ -0.7
SKA3-206ENST00000475251 C1orf174Q8IYL3 243 aa10.69□□□□□ -0.7
SKA3-206ENST00000475251 PAQR4Q8N4S7 273 aaPredicted RBP10.69□□□□□ -0.7
SKA3-206ENST00000475251 RBM15BQ8NDT2 890 aaKnown RBP10.69□□□□□ -0.7
SKA3-206ENST00000475251 OR1J1Q8NGS3 322 aa10.69□□□□□ -0.7
SKA3-206ENST00000475251 SLC25A44Q96H78 314 aaPredicted RBP10.69□□□□□ -0.7
SKA3-206ENST00000475251 MOGAT1Q96PD6 335 aa10.69□□□□□ -0.7
SKA3-206ENST00000475251 DIRC2Q96SL1 478 aa10.69□□□□□ -0.7
SKA3-206ENST00000475251 TMEM43Q9BTV4 400 aa10.69□□□□□ -0.7
SKA3-206ENST00000475251 SSU72Q9NP77 194 aaKnown RBP10.69□□□□□ -0.7
SKA3-206ENST00000475251 PURGQ9UJV8 347 aaKnown RBP10.69□□□□□ -0.7
SKA3-206ENST00000475251 AUP1Q9Y679 476 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms