RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 SEBOXQ9HB31 216 aaPredicted RBP16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 ADAP2Q9NPF8 381 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 MMP26Q9NRE1 261 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 KLHDC2Q9Y2U9 406 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 FAM96BQ9Y3D0 163 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 ENTPD2Q9Y5L3 495 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 XIRP2A4UGR9 3374 aa16.92■□□□□ 0.3
ECHDC1-214ENST00000474289 TMEM72A0PK05 275 aa16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 ALOX12BO75342 701 aa16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 ITGA5P08648 1049 aa16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 RPL4P36578 427 aaKnown RBP16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 SSBP1Q04837 148 aaKnown RBP16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 GFOD2Q3B7J2 385 aa16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 GXYLT1Q4G148 440 aa16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 SLC35D3Q5M8T2 416 aa16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 PRAMEF17Q5VTA0 474 aa16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 ZBTB8AQ96BR9 441 aa16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 INTS12Q96CB8 462 aaKnown RBP16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 RASD2Q96D21 266 aa16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 NMNAT2Q9BZQ4 307 aa16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 SPHK2Q9NRA0 654 aa16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 MRM2Q9UI43 246 aaKnown RBP16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 YBX2Q9Y2T7 364 aaKnown RBP16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 FOSL1P15407 271 aa16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 PTAFRP25105 342 aa16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 SMCO1Q147U7 214 aa16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 MLF2Q15773 248 aaPredicted RBP16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 EIF2S3LQ2VIR3 472 aaKnown RBP16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 PRRT3Q5FWE3 981 aa16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 LINC01590Q5TEZ4 76 aa16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 FAM220AQ7Z4H9 259 aa16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 COX18Q8N8Q8 333 aa16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 ZNF511Q8NB15 262 aa16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 RNF141Q8WVD5 230 aa16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 ARL5BQ96KC2 179 aa16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 NRIP2Q9BQI9 281 aa16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 RCC2Q9P258 522 aaKnown RBP16.91■□□□□ 0.3
ECHDC1-214ENST00000474289 NUDT19A8MXV4 375 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 CCL16O15467 120 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 SRPX2O60687 465 aaPredicted RBP16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 IGHV2-70P01814 119 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 CD74P04233 296 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 PGAM2P15259 253 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 SNRPNP63162 240 aaKnown RBP16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 CXADRP78310 365 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 ODF4Q2M2E3 257 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 ALG10BQ5I7T1 473 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 ARHGAP40Q5TG30 622 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 NAA40Q86UY6 237 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 ZNF417Q8TAU3 575 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 TMED6Q8WW62 240 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 SEH1LQ96EE3 360 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 FBXO17Q96EF6 278 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 RXFP3Q9NSD7 469 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 TRBV5-7A0A0A0MS05 114 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 F8VVB4 439 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 F8VWA3 439 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 CDC40O60508 579 aaKnown RBP eCLIP16.9■□□□□ 0.31e-6■□□□□ 9.9
ECHDC1-214ENST00000474289 TACSTD2P09758 323 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 TPT1P13693 172 aaKnown RBP16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 ZNF44P15621 663 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 ABCD3P28288 659 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 RAB28P51157 221 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 RBM39Q14498 530 aaKnown RBP16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 C2orf76Q3KRA6 126 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 SLC39A5Q6ZMH5 540 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 PARGQ86W56 976 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 RAB42Q8N4Z0 105 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 TMEM229BQ8NBD8 167 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 SLC30A7Q8NEW0 376 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 ARRDC3Q96B67 414 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 NKX3-1Q99801 234 aaPredicted RBP16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 ALG12Q9BV10 488 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 EDEM2Q9BV94 578 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 SELENOIQ9C0D9 397 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 GHRLQ9UBU3 117 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 WNT6Q9Y6F9 365 aa16.9■□□□□ 0.3
ECHDC1-214ENST00000474289 C4orf47A7E2U8 309 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 LDB3O75112 727 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 GLCEO94923 617 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 S100A6P06703 90 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 C8AP07357 584 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 FBXO45P0C2W1 286 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 ZNF735P0CB33 412 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 S100PP25815 95 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 TSFMP43897 325 aaKnown RBP16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 PPT1P50897 306 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 PJVKQ0ZLH3 352 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 SCGB2B2Q4G0G5 96 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 NKAPLQ5M9Q1 402 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 ZAR1Q86SH2 424 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 PAQR4Q8N4S7 273 aaPredicted RBP16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 ZNF614Q8N883 585 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 OR13C8Q8NGS7 320 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 OR10R2Q8NGX6 335 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 ATG5Q9H1Y0 275 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 SEMA6CQ9H3T2 930 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 ABHD16AO95870 558 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 RBM34P42696 430 aaKnown RBP16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 MST1LQ2TV78 715 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms