RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 PRSS58Q8IYP2 241 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 OR4S2Q8NH73 311 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 PLEKHA8Q96JA3 519 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 TCEANC2Q96MN5 208 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 ZNF578Q96N58 590 aaPredicted RBP1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 RNF157Q96PX1 679 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 PSKH2Q96QS6 385 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 CTRCQ99895 268 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 CRACR2AQ9BSW2 395 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 GABARAPL3Q9BY60 117 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 GORASP2Q9H8Y8 452 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 NTN4Q9HB63 628 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 NT5MQ9NPB1 228 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 SLCO1B3Q9NPD5 702 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 INPP5EQ9NRR6 644 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 EXTL2Q9UBQ6 330 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 IKZF2Q9UKS7 526 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 YTHDF2Q9Y5A9 579 aaKnown RBP1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 PHF3Q92576 2039 aaKnown RBP1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 MSH6P52701 1360 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 IGHV3-74A0A0B4J1X5 117 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 OR52A4PA6NMU1 304 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 HAS3O00219 553 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 RAB3DO95716 219 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 IGHV1-8P0DP01 117 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 PGAM1P18669 254 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 SERPINB5P36952 375 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 RPS21P63220 83 aaKnown RBP1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 ABCA11PQ4W5N1 156 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 LINC00483Q53H64 154 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 CTSL3PQ5NE16 218 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 THEM4Q5T1C6 240 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 HES5Q5TA89 166 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 FBXW9Q5XUX1 488 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 ZNF493Q6ZR52 646 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 THOC6Q86W42 341 aaKnown RBP1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 PGAM4Q8N0Y7 254 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 RNF182Q8N6D2 247 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 PIK3IP1Q96FE7 263 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 MS4A4EQ96PG1 132 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 P2RX4Q99571 388 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 TMEM59Q9BXS4 323 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 MRPL37Q9BZE1 423 aaKnown RBP1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 ZNF430Q9H8G1 570 aaPredicted RBP1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 FN3KRPQ9HA64 309 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 HMG20AQ9NP66 347 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 SAMSN1Q9NSI8 373 aaKnown RBP1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 F11RQ9Y624 299 aaKnown RBP1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 GAKO14976 1311 aa1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 MN1Q10571 1320 aaPredicted RBP1.88□□□□□ -2.11
ECHDC1-213ENST00000474240 IGLV1-50A0A075B6I6 118 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 IGLV3-22A0A075B6J6 115 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 IGLV2-18A0A075B6J9 118 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 TRAV40A0A0B4J280 105 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 CIB4A0PJX0 185 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 H0YHG0 523 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 PSTPIP1O43586 416 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 ENTPD5O75356 428 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 RBBP9O75884 186 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 RHOXF2BP0C7M4 288 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 MCF2P10911 925 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 MX1P20591 662 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 CRYBB2P43320 205 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 HNMTP50135 292 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 AIF1P55008 147 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 CHIT1Q13231 466 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 CLINT1Q14677 625 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 SF3A2Q15428 464 aaKnown RBP1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 RSPO1Q2MKA7 263 aaPredicted RBP1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 RABL6Q3YEC7 729 aaPredicted RBP1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 OR2A2Q6IF42 318 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 Q6ZR03 302 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 HDDC2Q7Z4H3 204 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 BIVMQ86UB2 503 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 OAFQ86UD1 273 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 LHFPL3Q86UP9 236 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 EGFL6Q8IUX8 553 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 PSTKQ8IV42 348 aaKnown RBP1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 ZNF695Q8IW36 515 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 PUSL1Q8N0Z8 303 aaKnown RBP1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 NOXO1Q8NFA2 376 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 OR1L4Q8NGR5 311 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 SYNPRQ8TBG9 265 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 ZNF721Q8TF20 911 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 TMEM54Q969K7 222 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 CREB3L1Q96BA8 519 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 SEH1LQ96EE3 360 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 PANX2Q96RD6 677 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 LZTS2Q9BRK4 669 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 ZNRD1Q9P1U0 126 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 ZNF629Q9UEG4 869 aaPredicted RBP1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 OPN4Q9UHM6 478 aa1.87□□□□□ -2.11
ECHDC1-213ENST00000474240 CEMIPQ8WUJ3 1361 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 SCN2AQ99250 2005 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 A0A1B0GVL5 298 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 A0A1W2PPE3 182 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 ZNF726A6NNF4 738 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 KMOO15229 486 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 TMEM50AO95807 157 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 IGLV3-19P01714 112 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms