RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 STMN4Q9H169 189 aaPredicted RBP3.22□□□□□ -1.89
BRCA1-212ENST00000473961 GBA3Q9H227 469 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 EHD1Q9H4M9 534 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 RANBP3Q9H6Z4 567 aaPredicted RBP3.22□□□□□ -1.89
BRCA1-212ENST00000473961 ZNF160Q9HCG1 818 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 INIPQ9NRY2 104 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 KCNIP1Q9NZI2 227 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 PISDQ9UG56 409 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 UBQLN1Q9UMX0 589 aaKnown RBP3.22□□□□□ -1.89
BRCA1-212ENST00000473961 PRELID1Q9Y255 219 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 STK38LQ9Y2H1 464 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 ARL2BPQ9Y2Y0 163 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 FAM32AQ9Y421 112 aaKnown RBP3.22□□□□□ -1.89
BRCA1-212ENST00000473961 V9GY05 133 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 TMEM94Q12767 1356 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 PLEKHG1Q9ULL1 1385 aa3.22□□□□□ -1.89
BRCA1-212ENST00000473961 NUP153P49790 1475 aaKnown RBP3.22□□□□□ -1.89
BRCA1-212ENST00000473961 GON4LQ3T8J9 2241 aa3.21□□□□□ -1.89
BRCA1-212ENST00000473961 SETBP1Q9Y6X0 1596 aa3.21□□□□□ -1.89
BRCA1-212ENST00000473961 TRBV11-1A0A0K0K1C0 115 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 H0YC42 278 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 GOLGA8TH3BQL2 631 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 DLGAP1O14490 977 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 CASC3O15234 703 aaKnown RBP3.21□□□□□ -1.9
BRCA1-212ENST00000473961 CACNG3O60359 315 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 SERPINB7O75635 380 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 THY1P04216 161 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 P04436 131 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 FGF1P05230 155 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 GOLGA8HP0CJ92 632 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 GATA1P15976 413 aaPredicted RBP3.21□□□□□ -1.9
BRCA1-212ENST00000473961 TBPP20226 339 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 KITLGP21583 273 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 SLC2A5P22732 501 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 FDFT1P37268 417 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 GLP1RP43220 463 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 KIR2DS4P43632 304 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 ARRB1P49407 418 aaPredicted RBP3.21□□□□□ -1.9
BRCA1-212ENST00000473961 TMED10P49755 219 aaKnown RBP3.21□□□□□ -1.9
BRCA1-212ENST00000473961 MEOX2P50222 304 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 HLCSP50747 726 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 BIDP55957 195 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 MAGOHP61326 146 aaKnown RBP3.21□□□□□ -1.9
BRCA1-212ENST00000473961 SELENOTP62341 195 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 RPS15P62841 145 aaKnown RBP3.21□□□□□ -1.9
BRCA1-212ENST00000473961 TNNC1P63316 161 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 RELAQ04206 551 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 ENPEPQ07075 957 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 MERTKQ12866 999 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 PNOCQ13519 176 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 SPCS2Q15005 226 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 SPA17Q15506 151 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 ZCWPW2Q504Y3 356 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 KLF17Q5JT82 389 aaPredicted RBP3.21□□□□□ -1.9
BRCA1-212ENST00000473961 CGB2Q6NT52 195 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 EIF3MQ7L2H7 374 aaKnown RBP3.21□□□□□ -1.9
BRCA1-212ENST00000473961 HSD17B13Q7Z5P4 300 aaPredicted RBP3.21□□□□□ -1.9
BRCA1-212ENST00000473961 LUZP2Q86TE4 346 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 NELFCDQ8IXH7 590 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 LRRC34Q8IZ02 419 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 SLC7A5P1Q8MH63 180 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 ACOT4Q8N9L9 421 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 OR2L3Q8NG85 312 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 OR4F6Q8NGB9 312 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 OR2AP1Q8NGE2 309 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 BRSK1Q8TDC3 778 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 GIMAP1Q8WWP7 306 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 MAGOHBQ96A72 148 aaKnown RBP3.21□□□□□ -1.9
BRCA1-212ENST00000473961 TM4SF19Q96DZ7 209 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 ANKRD36BP1Q96IX9 119 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 HSFY1Q96LI6 401 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 KLHDC3Q9BQ90 382 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 EBF4Q9BQW3 602 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 C11orf70Q9BRQ4 267 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 NICN1Q9BSH3 213 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 TMEM185BQ9H7F4 350 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 ZDHHC11Q9H8X9 412 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 GIN1Q9NXP7 522 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 EURLQ9NYK6 297 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 CD274Q9NZQ7 290 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 ZMAT5Q9UDW3 170 aaKnown RBP3.21□□□□□ -1.9
BRCA1-212ENST00000473961 STAP1Q9ULZ2 295 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 TRAF3IP3Q9Y228 551 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 USH1CQ9Y6N9 552 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 RFX7Q2KHR2 1363 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 ANKRD26Q9UPS8 1709 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 ADGRB1O14514 1584 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 MYH7P12883 1935 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 UGGT1Q9NYU2 1555 aa3.21□□□□□ -1.9
BRCA1-212ENST00000473961 CASZ1Q86V15 1759 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 PRG4Q92954 1404 aaPredicted RBP3.2□□□□□ -1.9
BRCA1-212ENST00000473961 TRPM2O94759 1503 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 ATP7AQ04656 1500 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.2□□□□□ -1.9
BRCA1-212ENST00000473961 LRRC7Q96NW7 1537 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 ZCCHC11Q5TAX3 1644 aaKnown RBP3.2□□□□□ -1.9
BRCA1-212ENST00000473961 MAP3K4Q9Y6R4 1608 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 ITSN1Q15811 1721 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 IGHV3OR16-13A0A075B7E8 117 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 A0A1B0GU03 582 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms