RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 PPP1R3DO95685 299 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 NOS3P29474 1203 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 SDHAP31040 664 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 CAPZA2P47755 286 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 NR1H2P55055 460 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 FXYD6P3P58550 94 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 ATP6AP1Q15904 470 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 LRFN4Q6PJG9 635 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 KLHL17Q6TDP4 642 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 ZNF813Q6ZN06 617 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 ZNF620Q6ZNG0 422 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 RASSF6Q6ZTQ3 369 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 MAGEE2Q8TD90 523 aaPredicted RBP10.88□□□□□ -0.67
DDX56-209ENST00000473924 PYDC1Q8WXC3 89 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 BCL2L2Q92843 193 aaPredicted RBP10.88□□□□□ -0.67
DDX56-209ENST00000473924 RASD2Q96D21 266 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 PLPPR2Q96GM1 343 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 KCNK17Q96T54 332 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 FEVQ99581 238 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 ALG12Q9BV10 488 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 C1QTNF6Q9BXI9 259 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 DGCR6LQ9BY27 220 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 CLEC4MQ9H2X3 399 aaPredicted RBP10.88□□□□□ -0.67
DDX56-209ENST00000473924 ESRP2Q9H6T0 727 aaKnown RBP10.88□□□□□ -0.67
DDX56-209ENST00000473924 EGLN3Q9H6Z9 239 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 OBP2BQ9NPH6 170 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 TBC1D23Q9NUY8 699 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 KIF17Q9P2E2 1029 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 MAGED1Q9Y5V3 778 aaPredicted RBP10.88□□□□□ -0.67
DDX56-209ENST00000473924 SLC25A15Q9Y619 301 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 CDH10Q9Y6N8 788 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 DEFB108AA8MXU0 73 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 H7C1C5 153 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 ENTPD5O75356 428 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 SLC2A10O95528 541 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 HRGP04196 525 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 ANXA8P13928 327 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 HOXB1P14653 301 aaPredicted RBP10.87□□□□□ -0.67
DDX56-209ENST00000473924 B4GALT1P15291 398 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 PRKACGP22612 351 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 GUCA1AP43080 201 aaPredicted RBP10.87□□□□□ -0.67
DDX56-209ENST00000473924 ZNF83P51522 516 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 LCN6P62502 163 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 FMODQ06828 376 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 COX10Q12887 443 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 KRR1Q13601 381 aaKnown RBP10.87□□□□□ -0.67
DDX56-209ENST00000473924 HIST3H3Q16695 136 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 MESTQ5EB52 335 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 CLEC12AQ5QGZ9 265 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 THEM4Q5T1C6 240 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 C1QTNF12Q5T7M4 302 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 ZFP1Q6P2D0 407 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 SHQ1Q6PI26 577 aaKnown RBP10.87□□□□□ -0.67
DDX56-209ENST00000473924 FAM122BQ7Z309 247 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 AMIGO2Q86SJ2 522 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 JAZF1Q86VZ6 243 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 CCDC36Q8IYA8 594 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 HS3ST5Q8IZT8 346 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 CLDN22Q8N7P3 220 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 WDR31Q8NA23 367 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 ATG16L2Q8NAA4 619 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 LRTOMTQ8WZ04 291 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 NSMAFQ92636 917 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 NRBF2Q96F24 287 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 BOD1Q96IK1 185 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 NIPSNAP1Q9BPW8 284 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 DENND2DQ9H6A0 471 aaPredicted RBP10.87□□□□□ -0.67
DDX56-209ENST00000473924 SMURF2Q9HAU4 748 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 NTN4Q9HB63 628 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 CRYBG3Q68DQ2 2970 aa10.87□□□□□ -0.67
DDX56-209ENST00000473924 ALPK2Q86TB3 2170 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 ARPC4-TTLL3A0A0A6YYG9 625 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 FAM221AA4D161 298 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 PRSS37A4D1T9 235 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 G3V2T6 193 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 H3BN98 237 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 M0R1B8 84 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 IMPA2O14732 288 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 SIAH2O43255 324 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 AHCYL1O43865 530 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 FARS2O95363 451 aaKnown RBP10.86□□□□□ -0.67
DDX56-209ENST00000473924 SOX14O95416 240 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 APEHP13798 732 aaKnown RBP10.86□□□□□ -0.67
DDX56-209ENST00000473924 ZNF23P17027 643 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 PAX7P23759 505 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 TUBA1BP68363 451 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 TUBA4AP68366 448 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 TMEM108Q6UXF1 575 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 CD300LDQ6UXZ3 194 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 TUBA1AQ71U36 451 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 ZNF627Q7L945 461 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 ADCK1Q86TW2 530 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 HIPK1Q86Z02 1210 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 ZDHHC13Q8IUH4 622 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 SLC22A24Q8N4F4 322 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 OR5K1Q8NHB7 308 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 TEX47Q8TBZ9 253 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 NANOS1Q8WY41 292 aaKnown RBP10.86□□□□□ -0.67
DDX56-209ENST00000473924 TSSK6Q9BXA6 273 aa10.86□□□□□ -0.67
DDX56-209ENST00000473924 NELFAQ9H3P2 528 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms